Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC23.13■■□□□ 1.29
ABCA3Q99758 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC23.13■■□□□ 1.29
ABCA3Q99758 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
ABCA3Q99758 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
ABCA3Q99758 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC23.13■■□□□ 1.29
ABCA3Q99758 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ABCA3Q99758 AC100757.3-201ENST00000622361 1406 ntBASIC23.13■■□□□ 1.29
ABCA3Q99758 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
ABCA3Q99758 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC23.13■■□□□ 1.29
ABCA3Q99758 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
ABCA3Q99758 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ABCA3Q99758 AC046185.3-201ENST00000623228 1824 ntBASIC23.12■■□□□ 1.29
ABCA3Q99758 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC23.12■■□□□ 1.29
ABCA3Q99758 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
ABCA3Q99758 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
ABCA3Q99758 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
ABCA3Q99758 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
ABCA3Q99758 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
ABCA3Q99758 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC23.12■■□□□ 1.29
ABCA3Q99758 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC23.12■■□□□ 1.29
ABCA3Q99758 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC23.12■■□□□ 1.29
ABCA3Q99758 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
ABCA3Q99758 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
ABCA3Q99758 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC23.12■■□□□ 1.29
ABCA3Q99758 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
ABCA3Q99758 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
ABCA3Q99758 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC23.12■■□□□ 1.29
ABCA3Q99758 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC23.12■■□□□ 1.29
ABCA3Q99758 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC23.11■■□□□ 1.29
ABCA3Q99758 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
ABCA3Q99758 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
ABCA3Q99758 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC23.11■■□□□ 1.29
ABCA3Q99758 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC23.11■■□□□ 1.29
ABCA3Q99758 ALG1L8P-201ENST00000533887 760 ntBASIC23.11■■□□□ 1.29
ABCA3Q99758 HNRNPRP1-201ENST00000453465 1695 ntBASIC23.11■■□□□ 1.29
ABCA3Q99758 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
ABCA3Q99758 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
ABCA3Q99758 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC23.11■■□□□ 1.29
ABCA3Q99758 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC23.11■■□□□ 1.29
ABCA3Q99758 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
ABCA3Q99758 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
ABCA3Q99758 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC23.11■■□□□ 1.29
ABCA3Q99758 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC23.11■■□□□ 1.29
ABCA3Q99758 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC23.11■■□□□ 1.29
ABCA3Q99758 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
ABCA3Q99758 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
ABCA3Q99758 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
ABCA3Q99758 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
ABCA3Q99758 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC23.11■■□□□ 1.29
ABCA3Q99758 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC23.11■■□□□ 1.29
ABCA3Q99758 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC23.11■■□□□ 1.29
ABCA3Q99758 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC23.11■■□□□ 1.29
ABCA3Q99758 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC23.11■■□□□ 1.29
ABCA3Q99758 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
ABCA3Q99758 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC23.11■■□□□ 1.29
ABCA3Q99758 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
ABCA3Q99758 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
ABCA3Q99758 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
ABCA3Q99758 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC23.1■■□□□ 1.29
ABCA3Q99758 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
ABCA3Q99758 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
ABCA3Q99758 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC23.1■■□□□ 1.29
ABCA3Q99758 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
ABCA3Q99758 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC23.1■■□□□ 1.29
ABCA3Q99758 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
ABCA3Q99758 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC23.1■■□□□ 1.29
ABCA3Q99758 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
ABCA3Q99758 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC23.1■■□□□ 1.29
ABCA3Q99758 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
ABCA3Q99758 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
ABCA3Q99758 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
ABCA3Q99758 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
ABCA3Q99758 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC23.09■■□□□ 1.29
ABCA3Q99758 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC23.09■■□□□ 1.29
ABCA3Q99758 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
ABCA3Q99758 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
ABCA3Q99758 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
ABCA3Q99758 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC23.09■■□□□ 1.29
ABCA3Q99758 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
ABCA3Q99758 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC23.09■■□□□ 1.29
ABCA3Q99758 SPDYE12P-201ENST00000618416 771 ntBASIC23.09■■□□□ 1.29
ABCA3Q99758 AL161645.1-201ENST00000622716 1255 ntBASIC23.09■■□□□ 1.29
ABCA3Q99758 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
ABCA3Q99758 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC23.09■■□□□ 1.29
ABCA3Q99758 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC23.09■■□□□ 1.29
ABCA3Q99758 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC23.09■■□□□ 1.29
ABCA3Q99758 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC23.09■■□□□ 1.29
ABCA3Q99758 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
ABCA3Q99758 AL020996.1-203ENST00000536896 2307 ntBASIC23.09■■□□□ 1.29
ABCA3Q99758 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC23.09■■□□□ 1.29
ABCA3Q99758 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
ABCA3Q99758 UXT-AS1-201ENST00000590504 1525 ntBASIC23.09■■□□□ 1.29
ABCA3Q99758 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC23.09■■□□□ 1.29
ABCA3Q99758 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC23.09■■□□□ 1.29
ABCA3Q99758 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
ABCA3Q99758 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC23.08■■□□□ 1.29
ABCA3Q99758 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
ABCA3Q99758 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC23.08■■□□□ 1.29
ABCA3Q99758 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC23.08■■□□□ 1.29
ABCA3Q99758 LINC01225-203ENST00000563550 1244 ntBASIC23.08■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms