Protein–RNA interactions for Protein: Q99741

CDC6, Cell division control protein 6 homolog, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC6Q99741 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC16.93■□□□□ 0.3
CDC6Q99741 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC16.93■□□□□ 0.3
CDC6Q99741 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDC6Q99741 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDC6Q99741 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.93■□□□□ 0.3
CDC6Q99741 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.92■□□□□ 0.3
CDC6Q99741 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.92■□□□□ 0.3
CDC6Q99741 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDC6Q99741 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.92■□□□□ 0.3
CDC6Q99741 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.92■□□□□ 0.3
CDC6Q99741 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CDC6Q99741 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CDC6Q99741 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDC6Q99741 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDC6Q99741 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDC6Q99741 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDC6Q99741 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.92■□□□□ 0.3
CDC6Q99741 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.92■□□□□ 0.3
CDC6Q99741 STK19B-204ENST00000512515 211 ntBASIC16.92■□□□□ 0.3
CDC6Q99741 IGHV3-52-201ENST00000519770 353 ntBASIC16.92■□□□□ 0.3
CDC6Q99741 AC116407.2-201ENST00000613639 860 ntBASIC16.92■□□□□ 0.3
CDC6Q99741 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDC6Q99741 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDC6Q99741 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDC6Q99741 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CDC6Q99741 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDC6Q99741 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDC6Q99741 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDC6Q99741 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDC6Q99741 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CDC6Q99741 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
CDC6Q99741 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDC6Q99741 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDC6Q99741 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CDC6Q99741 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
CDC6Q99741 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDC6Q99741 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CDC6Q99741 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC16.91■□□□□ 0.3
CDC6Q99741 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDC6Q99741 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.91■□□□□ 0.3
CDC6Q99741 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDC6Q99741 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDC6Q99741 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC16.91■□□□□ 0.3
CDC6Q99741 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.91■□□□□ 0.3
CDC6Q99741 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.91■□□□□ 0.3
CDC6Q99741 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.91■□□□□ 0.3
CDC6Q99741 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16.91■□□□□ 0.3
CDC6Q99741 HLA-J-203ENST00000494367 1087 ntBASIC16.91■□□□□ 0.3
CDC6Q99741 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.91■□□□□ 0.3
CDC6Q99741 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.91■□□□□ 0.3
CDC6Q99741 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDC6Q99741 REXO1L3P-201ENST00000622202 1288 ntBASIC16.91■□□□□ 0.3
CDC6Q99741 AC105339.1-204ENST00000636249 355 ntBASIC16.91■□□□□ 0.3
CDC6Q99741 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.91■□□□□ 0.3
CDC6Q99741 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC16.91■□□□□ 0.3
CDC6Q99741 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDC6Q99741 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.91■□□□□ 0.3
CDC6Q99741 AC097637.2-201ENST00000624096 1997 ntBASIC16.91■□□□□ 0.3
CDC6Q99741 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDC6Q99741 AC005332.7-201ENST00000614046 2005 ntBASIC16.91■□□□□ 0.3
CDC6Q99741 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDC6Q99741 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDC6Q99741 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CDC6Q99741 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDC6Q99741 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDC6Q99741 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDC6Q99741 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CDC6Q99741 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CDC6Q99741 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC16.9■□□□□ 0.3
CDC6Q99741 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDC6Q99741 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDC6Q99741 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDC6Q99741 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDC6Q99741 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDC6Q99741 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDC6Q99741 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.9■□□□□ 0.3
CDC6Q99741 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDC6Q99741 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDC6Q99741 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.9■□□□□ 0.3
CDC6Q99741 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.9■□□□□ 0.3
CDC6Q99741 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CDC6Q99741 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.9■□□□□ 0.3
CDC6Q99741 AC109462.3-201ENST00000573934 613 ntBASIC16.9■□□□□ 0.3
CDC6Q99741 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.9■□□□□ 0.3
CDC6Q99741 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.9■□□□□ 0.3
CDC6Q99741 AL353135.1-201ENST00000606729 504 ntBASIC16.9■□□□□ 0.3
CDC6Q99741 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.9■□□□□ 0.3
CDC6Q99741 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDC6Q99741 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CDC6Q99741 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDC6Q99741 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDC6Q99741 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDC6Q99741 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDC6Q99741 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC16.9■□□□□ 0.3
CDC6Q99741 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDC6Q99741 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDC6Q99741 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDC6Q99741 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.89■□□□□ 0.29
CDC6Q99741 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDC6Q99741 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms