Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDK5RAP2Q96SN8 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDK5RAP2Q96SN8 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC20.52■□□□□ 0.88
CDK5RAP2Q96SN8 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC20.52■□□□□ 0.88
CDK5RAP2Q96SN8 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CDK5RAP2Q96SN8 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.87
CDK5RAP2Q96SN8 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
CDK5RAP2Q96SN8 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC20.52■□□□□ 0.87
CDK5RAP2Q96SN8 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC20.52■□□□□ 0.87
CDK5RAP2Q96SN8 ATP6V0CP3-201ENST00000417255 467 ntBASIC20.52■□□□□ 0.87
CDK5RAP2Q96SN8 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC20.52■□□□□ 0.87
CDK5RAP2Q96SN8 AP006288.1-201ENST00000446065 395 ntBASIC20.52■□□□□ 0.87
CDK5RAP2Q96SN8 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC20.52■□□□□ 0.87
CDK5RAP2Q96SN8 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC20.52■□□□□ 0.87
CDK5RAP2Q96SN8 MTDHP5-201ENST00000598980 586 ntBASIC20.52■□□□□ 0.87
CDK5RAP2Q96SN8 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDK5RAP2Q96SN8 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDK5RAP2Q96SN8 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDK5RAP2Q96SN8 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC20.51■□□□□ 0.87
CDK5RAP2Q96SN8 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC20.51■□□□□ 0.87
CDK5RAP2Q96SN8 AC133963.1-201ENST00000504166 1679 ntBASIC20.51■□□□□ 0.87
CDK5RAP2Q96SN8 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDK5RAP2Q96SN8 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CDK5RAP2Q96SN8 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC20.51■□□□□ 0.87
CDK5RAP2Q96SN8 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC20.51■□□□□ 0.87
CDK5RAP2Q96SN8 RPS8P6-201ENST00000426177 609 ntBASIC20.51■□□□□ 0.87
CDK5RAP2Q96SN8 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC20.51■□□□□ 0.87
CDK5RAP2Q96SN8 AC004967.1-201ENST00000453589 447 ntBASIC20.51■□□□□ 0.87
CDK5RAP2Q96SN8 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CDK5RAP2Q96SN8 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC20.51■□□□□ 0.87
CDK5RAP2Q96SN8 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC20.51■□□□□ 0.87
CDK5RAP2Q96SN8 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC20.51■□□□□ 0.87
CDK5RAP2Q96SN8 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC20.51■□□□□ 0.87
CDK5RAP2Q96SN8 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC20.51■□□□□ 0.87
CDK5RAP2Q96SN8 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC20.51■□□□□ 0.87
CDK5RAP2Q96SN8 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDK5RAP2Q96SN8 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC20.51■□□□□ 0.87
CDK5RAP2Q96SN8 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDK5RAP2Q96SN8 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDK5RAP2Q96SN8 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CDK5RAP2Q96SN8 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC20.5■□□□□ 0.87
CDK5RAP2Q96SN8 URGCP-206ENST00000446958 365 ntTSL 2 BASIC20.5■□□□□ 0.87
CDK5RAP2Q96SN8 CFL1-202ENST00000524553 860 ntTSL 2 BASIC20.5■□□□□ 0.87
CDK5RAP2Q96SN8 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC20.5■□□□□ 0.87
CDK5RAP2Q96SN8 AP001160.2-201ENST00000596071 487 ntBASIC20.5■□□□□ 0.87
CDK5RAP2Q96SN8 AC004877.2-201ENST00000623941 599 ntBASIC20.5■□□□□ 0.87
CDK5RAP2Q96SN8 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
CDK5RAP2Q96SN8 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDK5RAP2Q96SN8 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDK5RAP2Q96SN8 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDK5RAP2Q96SN8 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
CDK5RAP2Q96SN8 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDK5RAP2Q96SN8 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDK5RAP2Q96SN8 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDK5RAP2Q96SN8 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC20.5■□□□□ 0.87
CDK5RAP2Q96SN8 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC20.5■□□□□ 0.87
CDK5RAP2Q96SN8 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDK5RAP2Q96SN8 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CDK5RAP2Q96SN8 AC211486.1-202ENST00000416371 468 ntBASIC20.5■□□□□ 0.87
CDK5RAP2Q96SN8 MKNK2P1-201ENST00000437526 628 ntBASIC20.5■□□□□ 0.87
CDK5RAP2Q96SN8 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDK5RAP2Q96SN8 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC20.5■□□□□ 0.87
CDK5RAP2Q96SN8 AC211476.1-201ENST00000503899 468 ntBASIC20.5■□□□□ 0.87
CDK5RAP2Q96SN8 YBX1P5-201ENST00000509441 847 ntBASIC20.5■□□□□ 0.87
CDK5RAP2Q96SN8 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC20.5■□□□□ 0.87
CDK5RAP2Q96SN8 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CDK5RAP2Q96SN8 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDK5RAP2Q96SN8 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDK5RAP2Q96SN8 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.49■□□□□ 0.87
CDK5RAP2Q96SN8 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDK5RAP2Q96SN8 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CDK5RAP2Q96SN8 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC20.49■□□□□ 0.87
CDK5RAP2Q96SN8 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC20.49■□□□□ 0.87
CDK5RAP2Q96SN8 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC20.49■□□□□ 0.87
CDK5RAP2Q96SN8 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDK5RAP2Q96SN8 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDK5RAP2Q96SN8 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
CDK5RAP2Q96SN8 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDK5RAP2Q96SN8 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CDK5RAP2Q96SN8 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDK5RAP2Q96SN8 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDK5RAP2Q96SN8 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CDK5RAP2Q96SN8 PMS2P2-201ENST00000425039 1128 ntBASIC20.49■□□□□ 0.87
CDK5RAP2Q96SN8 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC20.49■□□□□ 0.87
CDK5RAP2Q96SN8 AC112482.1-201ENST00000492080 688 ntBASIC20.49■□□□□ 0.87
CDK5RAP2Q96SN8 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC20.49■□□□□ 0.87
CDK5RAP2Q96SN8 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC20.49■□□□□ 0.87
CDK5RAP2Q96SN8 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC20.49■□□□□ 0.87
CDK5RAP2Q96SN8 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC20.49■□□□□ 0.87
CDK5RAP2Q96SN8 AC134684.3-201ENST00000641758 218 ntBASIC20.49■□□□□ 0.87
CDK5RAP2Q96SN8 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDK5RAP2Q96SN8 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC20.49■□□□□ 0.87
CDK5RAP2Q96SN8 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC20.49■□□□□ 0.87
CDK5RAP2Q96SN8 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
CDK5RAP2Q96SN8 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CDK5RAP2Q96SN8 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC20.48■□□□□ 0.87
CDK5RAP2Q96SN8 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC20.48■□□□□ 0.87
CDK5RAP2Q96SN8 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC20.48■□□□□ 0.87
CDK5RAP2Q96SN8 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CDK5RAP2Q96SN8 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms