Protein–RNA interactions for Protein: Q96QV6

HIST1H2AA, Histone H2A type 1-A, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2AAQ96QV6 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.28■□□□□ 0.04
HIST1H2AAQ96QV6 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HIST1H2AAQ96QV6 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HIST1H2AAQ96QV6 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
HIST1H2AAQ96QV6 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HIST1H2AAQ96QV6 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HIST1H2AAQ96QV6 BAALC-202ENST00000306391 243 ntTSL 5 BASIC15.28■□□□□ 0.04
HIST1H2AAQ96QV6 BAALC-204ENST00000330955 222 ntTSL 5 BASIC15.28■□□□□ 0.04
HIST1H2AAQ96QV6 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC15.28■□□□□ 0.04
HIST1H2AAQ96QV6 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC15.28■□□□□ 0.04
HIST1H2AAQ96QV6 DDX43P3-201ENST00000441064 443 ntBASIC15.28■□□□□ 0.04
HIST1H2AAQ96QV6 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
HIST1H2AAQ96QV6 AL671277.2-201ENST00000458060 996 ntBASIC15.28■□□□□ 0.04
HIST1H2AAQ96QV6 AC022616.7-201ENST00000525383 220 ntBASIC15.28■□□□□ 0.04
HIST1H2AAQ96QV6 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
HIST1H2AAQ96QV6 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC15.28■□□□□ 0.04
HIST1H2AAQ96QV6 RN7SL850P-201ENST00000579959 291 ntBASIC15.28■□□□□ 0.04
HIST1H2AAQ96QV6 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC15.28■□□□□ 0.04
HIST1H2AAQ96QV6 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC15.28■□□□□ 0.04
HIST1H2AAQ96QV6 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HIST1H2AAQ96QV6 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HIST1H2AAQ96QV6 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC15.28■□□□□ 0.04
HIST1H2AAQ96QV6 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HIST1H2AAQ96QV6 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HIST1H2AAQ96QV6 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
HIST1H2AAQ96QV6 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
HIST1H2AAQ96QV6 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HIST1H2AAQ96QV6 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HIST1H2AAQ96QV6 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HIST1H2AAQ96QV6 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HIST1H2AAQ96QV6 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HIST1H2AAQ96QV6 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
HIST1H2AAQ96QV6 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC15.27■□□□□ 0.04
HIST1H2AAQ96QV6 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
HIST1H2AAQ96QV6 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HIST1H2AAQ96QV6 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HIST1H2AAQ96QV6 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
HIST1H2AAQ96QV6 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HIST1H2AAQ96QV6 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HIST1H2AAQ96QV6 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HIST1H2AAQ96QV6 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC15.27■□□□□ 0.04
HIST1H2AAQ96QV6 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HIST1H2AAQ96QV6 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC15.27■□□□□ 0.04
HIST1H2AAQ96QV6 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC15.27■□□□□ 0.04
HIST1H2AAQ96QV6 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC15.27■□□□□ 0.04
HIST1H2AAQ96QV6 DUX4L26-201ENST00000489078 1255 ntBASIC15.27■□□□□ 0.04
HIST1H2AAQ96QV6 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC15.27■□□□□ 0.04
HIST1H2AAQ96QV6 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC15.27■□□□□ 0.04
HIST1H2AAQ96QV6 ARL16-209ENST00000573715 763 ntTSL 3 BASIC15.27■□□□□ 0.04
HIST1H2AAQ96QV6 ARL16-211ENST00000576135 694 ntTSL 3 BASIC15.27■□□□□ 0.04
HIST1H2AAQ96QV6 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC15.27■□□□□ 0.04
HIST1H2AAQ96QV6 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HIST1H2AAQ96QV6 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
HIST1H2AAQ96QV6 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.03
HIST1H2AAQ96QV6 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HIST1H2AAQ96QV6 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
HIST1H2AAQ96QV6 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
HIST1H2AAQ96QV6 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC15.27■□□□□ 0.03
HIST1H2AAQ96QV6 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
HIST1H2AAQ96QV6 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
HIST1H2AAQ96QV6 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
HIST1H2AAQ96QV6 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC15.27■□□□□ 0.03
HIST1H2AAQ96QV6 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
HIST1H2AAQ96QV6 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC15.27■□□□□ 0.03
HIST1H2AAQ96QV6 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HIST1H2AAQ96QV6 MED29-202ENST00000594368 1471 ntTSL 2 BASIC15.27■□□□□ 0.03
HIST1H2AAQ96QV6 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
HIST1H2AAQ96QV6 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HIST1H2AAQ96QV6 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.26■□□□□ 0.03
HIST1H2AAQ96QV6 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
HIST1H2AAQ96QV6 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
HIST1H2AAQ96QV6 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HIST1H2AAQ96QV6 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC15.26■□□□□ 0.03
HIST1H2AAQ96QV6 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
HIST1H2AAQ96QV6 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
HIST1H2AAQ96QV6 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
HIST1H2AAQ96QV6 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HIST1H2AAQ96QV6 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HIST1H2AAQ96QV6 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HIST1H2AAQ96QV6 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
HIST1H2AAQ96QV6 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HIST1H2AAQ96QV6 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
HIST1H2AAQ96QV6 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HIST1H2AAQ96QV6 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HIST1H2AAQ96QV6 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
HIST1H2AAQ96QV6 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HIST1H2AAQ96QV6 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC15.26■□□□□ 0.03
HIST1H2AAQ96QV6 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HIST1H2AAQ96QV6 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC15.26■□□□□ 0.03
HIST1H2AAQ96QV6 RCN1P1-201ENST00000400413 996 ntBASIC15.26■□□□□ 0.03
HIST1H2AAQ96QV6 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC15.26■□□□□ 0.03
HIST1H2AAQ96QV6 GUSBP12-201ENST00000513727 720 ntBASIC15.26■□□□□ 0.03
HIST1H2AAQ96QV6 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC15.26■□□□□ 0.03
HIST1H2AAQ96QV6 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC15.26■□□□□ 0.03
HIST1H2AAQ96QV6 CLN6-204ENST00000564752 900 ntTSL 3 BASIC15.26■□□□□ 0.03
HIST1H2AAQ96QV6 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC15.26■□□□□ 0.03
HIST1H2AAQ96QV6 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC15.26■□□□□ 0.03
HIST1H2AAQ96QV6 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
HIST1H2AAQ96QV6 CLN6-214ENST00000636314 442 ntTSL 3 BASIC15.26■□□□□ 0.03
HIST1H2AAQ96QV6 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms