Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CSMD1Q96PZ7 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CSMD1Q96PZ7 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CSMD1Q96PZ7 MIR149-201ENST00000384879 89 ntBASIC14.85□□□□□ -0.03
CSMD1Q96PZ7 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CSMD1Q96PZ7 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CSMD1Q96PZ7 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.85□□□□□ -0.03
CSMD1Q96PZ7 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CSMD1Q96PZ7 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CSMD1Q96PZ7 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
CSMD1Q96PZ7 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.85□□□□□ -0.03
CSMD1Q96PZ7 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CSMD1Q96PZ7 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
CSMD1Q96PZ7 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CSMD1Q96PZ7 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC14.85□□□□□ -0.03
CSMD1Q96PZ7 CD276-201ENST00000318424 2738 ntTSL 5 BASIC14.85□□□□□ -0.03
CSMD1Q96PZ7 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC14.85□□□□□ -0.03
CSMD1Q96PZ7 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC14.85□□□□□ -0.03
CSMD1Q96PZ7 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CSMD1Q96PZ7 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CSMD1Q96PZ7 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CSMD1Q96PZ7 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CSMD1Q96PZ7 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CSMD1Q96PZ7 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CSMD1Q96PZ7 AC079776.1-201ENST00000401540 1152 ntBASIC14.84□□□□□ -0.03
CSMD1Q96PZ7 TREML5P-201ENST00000421694 576 ntBASIC14.84□□□□□ -0.03
CSMD1Q96PZ7 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.84□□□□□ -0.03
CSMD1Q96PZ7 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC14.84□□□□□ -0.03
CSMD1Q96PZ7 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CSMD1Q96PZ7 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC14.84□□□□□ -0.03
CSMD1Q96PZ7 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
CSMD1Q96PZ7 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CSMD1Q96PZ7 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CSMD1Q96PZ7 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.84□□□□□ -0.03
CSMD1Q96PZ7 KRT18P65-201ENST00000439811 1286 ntBASIC14.84□□□□□ -0.03
CSMD1Q96PZ7 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CSMD1Q96PZ7 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC14.84□□□□□ -0.03
CSMD1Q96PZ7 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CSMD1Q96PZ7 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CSMD1Q96PZ7 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CSMD1Q96PZ7 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CSMD1Q96PZ7 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC14.84□□□□□ -0.03
CSMD1Q96PZ7 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CSMD1Q96PZ7 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CSMD1Q96PZ7 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC14.84□□□□□ -0.03
CSMD1Q96PZ7 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CSMD1Q96PZ7 AL020989.1-201ENST00000422979 469 ntBASIC14.84□□□□□ -0.03
CSMD1Q96PZ7 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC14.84□□□□□ -0.03
CSMD1Q96PZ7 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC14.84□□□□□ -0.03
CSMD1Q96PZ7 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CSMD1Q96PZ7 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
CSMD1Q96PZ7 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC14.83□□□□□ -0.03
CSMD1Q96PZ7 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC14.83□□□□□ -0.03
CSMD1Q96PZ7 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CSMD1Q96PZ7 AL020996.1-203ENST00000536896 2307 ntBASIC14.83□□□□□ -0.03
CSMD1Q96PZ7 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
CSMD1Q96PZ7 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CSMD1Q96PZ7 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CSMD1Q96PZ7 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CSMD1Q96PZ7 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
CSMD1Q96PZ7 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CSMD1Q96PZ7 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CSMD1Q96PZ7 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CSMD1Q96PZ7 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
CSMD1Q96PZ7 AC004890.2-204ENST00000481968 304 ntBASIC14.83□□□□□ -0.04
CSMD1Q96PZ7 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CSMD1Q96PZ7 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
CSMD1Q96PZ7 AC023141.13-201ENST00000604991 943 ntBASIC14.83□□□□□ -0.04
CSMD1Q96PZ7 MIR6787-201ENST00000616675 61 ntBASIC14.83□□□□□ -0.04
CSMD1Q96PZ7 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
CSMD1Q96PZ7 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CSMD1Q96PZ7 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CSMD1Q96PZ7 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.04
CSMD1Q96PZ7 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC14.83□□□□□ -0.04
CSMD1Q96PZ7 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CSMD1Q96PZ7 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.83□□□□□ -0.04
CSMD1Q96PZ7 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC14.83□□□□□ -0.04
CSMD1Q96PZ7 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.83□□□□□ -0.04
CSMD1Q96PZ7 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC14.83□□□□□ -0.04
CSMD1Q96PZ7 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC14.83□□□□□ -0.04
CSMD1Q96PZ7 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CSMD1Q96PZ7 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC14.83□□□□□ -0.04
CSMD1Q96PZ7 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC14.83□□□□□ -0.04
CSMD1Q96PZ7 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CSMD1Q96PZ7 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CSMD1Q96PZ7 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CSMD1Q96PZ7 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC14.82□□□□□ -0.04
CSMD1Q96PZ7 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CSMD1Q96PZ7 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CSMD1Q96PZ7 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CSMD1Q96PZ7 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CSMD1Q96PZ7 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CSMD1Q96PZ7 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC14.82□□□□□ -0.04
CSMD1Q96PZ7 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CSMD1Q96PZ7 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CSMD1Q96PZ7 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CSMD1Q96PZ7 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CSMD1Q96PZ7 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC14.82□□□□□ -0.04
CSMD1Q96PZ7 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CSMD1Q96PZ7 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms