Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.93■□□□□ 0.62
SNX27Q96L92 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SNX27Q96L92 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC18.93■□□□□ 0.62
SNX27Q96L92 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.93■□□□□ 0.62
SNX27Q96L92 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
SNX27Q96L92 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.93■□□□□ 0.62
SNX27Q96L92 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC18.93■□□□□ 0.62
SNX27Q96L92 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.93■□□□□ 0.62
SNX27Q96L92 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
SNX27Q96L92 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC18.93■□□□□ 0.62
SNX27Q96L92 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC18.93■□□□□ 0.62
SNX27Q96L92 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
SNX27Q96L92 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SNX27Q96L92 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
SNX27Q96L92 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
SNX27Q96L92 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SNX27Q96L92 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SNX27Q96L92 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SNX27Q96L92 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SNX27Q96L92 LINC00304-203ENST00000565008 1864 ntBASIC18.92■□□□□ 0.62
SNX27Q96L92 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SNX27Q96L92 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SNX27Q96L92 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SNX27Q96L92 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SNX27Q96L92 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SNX27Q96L92 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SNX27Q96L92 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
SNX27Q96L92 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SNX27Q96L92 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
SNX27Q96L92 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SNX27Q96L92 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.92■□□□□ 0.62
SNX27Q96L92 KRT18P27-201ENST00000427733 1299 ntBASIC18.92■□□□□ 0.62
SNX27Q96L92 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.92■□□□□ 0.62
SNX27Q96L92 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.92■□□□□ 0.62
SNX27Q96L92 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC18.92■□□□□ 0.62
SNX27Q96L92 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.92■□□□□ 0.62
SNX27Q96L92 AC105339.3-201ENST00000560043 636 ntBASIC18.92■□□□□ 0.62
SNX27Q96L92 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
SNX27Q96L92 PRR29-209ENST00000582540 967 ntTSL 2 BASIC18.92■□□□□ 0.62
SNX27Q96L92 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.92■□□□□ 0.62
SNX27Q96L92 AL589182.2-201ENST00000619332 1049 ntBASIC18.92■□□□□ 0.62
SNX27Q96L92 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.92■□□□□ 0.62
SNX27Q96L92 AC008764.6-201ENST00000595909 2069 ntBASIC18.92■□□□□ 0.62
SNX27Q96L92 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SNX27Q96L92 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.92■□□□□ 0.62
SNX27Q96L92 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SNX27Q96L92 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
SNX27Q96L92 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
SNX27Q96L92 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SNX27Q96L92 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SNX27Q96L92 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.91■□□□□ 0.62
SNX27Q96L92 AP002414.3-201ENST00000589352 1468 ntBASIC18.91■□□□□ 0.62
SNX27Q96L92 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.91■□□□□ 0.62
SNX27Q96L92 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.91■□□□□ 0.62
SNX27Q96L92 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.91■□□□□ 0.62
SNX27Q96L92 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
SNX27Q96L92 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SNX27Q96L92 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.91■□□□□ 0.62
SNX27Q96L92 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SNX27Q96L92 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.91■□□□□ 0.62
SNX27Q96L92 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SNX27Q96L92 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SNX27Q96L92 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.91■□□□□ 0.62
SNX27Q96L92 AC092910.1-201ENST00000482027 1129 ntBASIC18.91■□□□□ 0.62
SNX27Q96L92 IGHV3-22-201ENST00000520721 359 ntBASIC18.91■□□□□ 0.62
SNX27Q96L92 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC18.91■□□□□ 0.62
SNX27Q96L92 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.91■□□□□ 0.62
SNX27Q96L92 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SNX27Q96L92 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.91■□□□□ 0.62
SNX27Q96L92 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC18.91■□□□□ 0.62
SNX27Q96L92 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC18.91■□□□□ 0.62
SNX27Q96L92 LINC01451-201ENST00000623792 534 ntBASIC18.91■□□□□ 0.62
SNX27Q96L92 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
SNX27Q96L92 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SNX27Q96L92 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SNX27Q96L92 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SNX27Q96L92 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.91■□□□□ 0.62
SNX27Q96L92 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.91■□□□□ 0.62
SNX27Q96L92 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SNX27Q96L92 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SNX27Q96L92 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
SNX27Q96L92 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SNX27Q96L92 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
SNX27Q96L92 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SNX27Q96L92 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
SNX27Q96L92 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SNX27Q96L92 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SNX27Q96L92 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.9■□□□□ 0.62
SNX27Q96L92 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.9■□□□□ 0.62
SNX27Q96L92 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SNX27Q96L92 INIP-202ENST00000374236 874 ntTSL 2 BASIC18.9■□□□□ 0.62
SNX27Q96L92 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.9■□□□□ 0.62
SNX27Q96L92 HLA-V-201ENST00000429037 534 ntBASIC18.9■□□□□ 0.62
SNX27Q96L92 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC18.9■□□□□ 0.62
SNX27Q96L92 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.9■□□□□ 0.62
SNX27Q96L92 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.9■□□□□ 0.62
SNX27Q96L92 AC006557.2-201ENST00000592985 1240 ntBASIC18.9■□□□□ 0.62
SNX27Q96L92 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SNX27Q96L92 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.9■□□□□ 0.62
SNX27Q96L92 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms