Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHMP6Q96FZ7 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CHMP6Q96FZ7 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHMP6Q96FZ7 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.74■□□□□ 0.43
CHMP6Q96FZ7 AL024508.2-201ENST00000607749 1894 ntBASIC17.74■□□□□ 0.43
CHMP6Q96FZ7 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CHMP6Q96FZ7 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHMP6Q96FZ7 AC007950.2-201ENST00000615045 2347 ntBASIC17.74■□□□□ 0.43
CHMP6Q96FZ7 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHMP6Q96FZ7 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CHMP6Q96FZ7 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CHMP6Q96FZ7 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHMP6Q96FZ7 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHMP6Q96FZ7 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CHMP6Q96FZ7 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CHMP6Q96FZ7 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.74■□□□□ 0.43
CHMP6Q96FZ7 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.74■□□□□ 0.43
CHMP6Q96FZ7 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CHMP6Q96FZ7 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CHMP6Q96FZ7 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CHMP6Q96FZ7 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.74■□□□□ 0.43
CHMP6Q96FZ7 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CHMP6Q96FZ7 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHMP6Q96FZ7 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHMP6Q96FZ7 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHMP6Q96FZ7 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.74■□□□□ 0.43
CHMP6Q96FZ7 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHMP6Q96FZ7 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHMP6Q96FZ7 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CHMP6Q96FZ7 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CHMP6Q96FZ7 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHMP6Q96FZ7 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CHMP6Q96FZ7 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CHMP6Q96FZ7 GPAT2P1-201ENST00000444924 1672 ntBASIC17.74■□□□□ 0.43
CHMP6Q96FZ7 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHMP6Q96FZ7 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHMP6Q96FZ7 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
CHMP6Q96FZ7 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CHMP6Q96FZ7 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.73■□□□□ 0.43
CHMP6Q96FZ7 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CHMP6Q96FZ7 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.73■□□□□ 0.43
CHMP6Q96FZ7 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHMP6Q96FZ7 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHMP6Q96FZ7 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHMP6Q96FZ7 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.73■□□□□ 0.43
CHMP6Q96FZ7 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.73■□□□□ 0.43
CHMP6Q96FZ7 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CHMP6Q96FZ7 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.73■□□□□ 0.43
CHMP6Q96FZ7 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHMP6Q96FZ7 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHMP6Q96FZ7 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHMP6Q96FZ7 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHMP6Q96FZ7 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.73■□□□□ 0.43
CHMP6Q96FZ7 AC004951.3-201ENST00000418645 1148 ntBASIC17.73■□□□□ 0.43
CHMP6Q96FZ7 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CHMP6Q96FZ7 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.73■□□□□ 0.43
CHMP6Q96FZ7 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.73■□□□□ 0.43
CHMP6Q96FZ7 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.73■□□□□ 0.43
CHMP6Q96FZ7 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.73■□□□□ 0.43
CHMP6Q96FZ7 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.73■□□□□ 0.43
CHMP6Q96FZ7 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHMP6Q96FZ7 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.73■□□□□ 0.43
CHMP6Q96FZ7 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.73■□□□□ 0.43
CHMP6Q96FZ7 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.73■□□□□ 0.43
CHMP6Q96FZ7 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CHMP6Q96FZ7 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHMP6Q96FZ7 AC036111.1-201ENST00000533973 1582 ntBASIC17.73■□□□□ 0.43
CHMP6Q96FZ7 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHMP6Q96FZ7 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHMP6Q96FZ7 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CHMP6Q96FZ7 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
CHMP6Q96FZ7 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHMP6Q96FZ7 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.73■□□□□ 0.43
CHMP6Q96FZ7 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.73■□□□□ 0.43
CHMP6Q96FZ7 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CHMP6Q96FZ7 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHMP6Q96FZ7 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHMP6Q96FZ7 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHMP6Q96FZ7 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC17.72■□□□□ 0.43
CHMP6Q96FZ7 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
CHMP6Q96FZ7 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.72■□□□□ 0.43
CHMP6Q96FZ7 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHMP6Q96FZ7 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHMP6Q96FZ7 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CHMP6Q96FZ7 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CHMP6Q96FZ7 CYP2T1P-202ENST00000641596 2535 ntBASIC17.72■□□□□ 0.43
CHMP6Q96FZ7 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHMP6Q96FZ7 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CHMP6Q96FZ7 AC022188.1-201ENST00000620960 1664 ntBASIC17.72■□□□□ 0.43
CHMP6Q96FZ7 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CHMP6Q96FZ7 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.72■□□□□ 0.43
CHMP6Q96FZ7 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.72■□□□□ 0.43
CHMP6Q96FZ7 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHMP6Q96FZ7 PRORSD1P-201ENST00000295112 541 ntBASIC17.72■□□□□ 0.43
CHMP6Q96FZ7 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CHMP6Q96FZ7 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CHMP6Q96FZ7 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CHMP6Q96FZ7 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CHMP6Q96FZ7 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHMP6Q96FZ7 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms