Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.27■□□□□ 0.2
CTHRC1Q96CG8 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.27■□□□□ 0.2
CTHRC1Q96CG8 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.27■□□□□ 0.2
CTHRC1Q96CG8 AL732292.2-201ENST00000609649 430 ntBASIC16.27■□□□□ 0.2
CTHRC1Q96CG8 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CTHRC1Q96CG8 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTHRC1Q96CG8 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.27■□□□□ 0.2
CTHRC1Q96CG8 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.27■□□□□ 0.2
CTHRC1Q96CG8 EML3-217ENST00000531557 2509 ntTSL 5 BASIC16.27■□□□□ 0.2
CTHRC1Q96CG8 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CTHRC1Q96CG8 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CTHRC1Q96CG8 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.27■□□□□ 0.19
CTHRC1Q96CG8 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.19
CTHRC1Q96CG8 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
CTHRC1Q96CG8 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CTHRC1Q96CG8 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CTHRC1Q96CG8 AC116353.5-201ENST00000638148 1699 ntBASIC16.27■□□□□ 0.19
CTHRC1Q96CG8 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
CTHRC1Q96CG8 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
CTHRC1Q96CG8 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
CTHRC1Q96CG8 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CTHRC1Q96CG8 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
CTHRC1Q96CG8 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CTHRC1Q96CG8 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTHRC1Q96CG8 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTHRC1Q96CG8 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CTHRC1Q96CG8 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CTHRC1Q96CG8 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTHRC1Q96CG8 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTHRC1Q96CG8 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTHRC1Q96CG8 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTHRC1Q96CG8 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTHRC1Q96CG8 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTHRC1Q96CG8 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.26■□□□□ 0.19
CTHRC1Q96CG8 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.26■□□□□ 0.19
CTHRC1Q96CG8 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTHRC1Q96CG8 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
CTHRC1Q96CG8 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.26■□□□□ 0.19
CTHRC1Q96CG8 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.26■□□□□ 0.19
CTHRC1Q96CG8 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CTHRC1Q96CG8 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.26■□□□□ 0.19
CTHRC1Q96CG8 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTHRC1Q96CG8 AC079776.2-201ENST00000641154 1609 ntBASIC16.26■□□□□ 0.19
CTHRC1Q96CG8 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.26■□□□□ 0.19
CTHRC1Q96CG8 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
CTHRC1Q96CG8 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTHRC1Q96CG8 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CTHRC1Q96CG8 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CTHRC1Q96CG8 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTHRC1Q96CG8 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CTHRC1Q96CG8 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CTHRC1Q96CG8 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.25■□□□□ 0.19
CTHRC1Q96CG8 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CTHRC1Q96CG8 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.25■□□□□ 0.19
CTHRC1Q96CG8 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CTHRC1Q96CG8 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC16.25■□□□□ 0.19
CTHRC1Q96CG8 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.25■□□□□ 0.19
CTHRC1Q96CG8 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.25■□□□□ 0.19
CTHRC1Q96CG8 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CTHRC1Q96CG8 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.25■□□□□ 0.19
CTHRC1Q96CG8 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.25■□□□□ 0.19
CTHRC1Q96CG8 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.25■□□□□ 0.19
CTHRC1Q96CG8 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CTHRC1Q96CG8 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.25■□□□□ 0.19
CTHRC1Q96CG8 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CTHRC1Q96CG8 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CTHRC1Q96CG8 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.25■□□□□ 0.19
CTHRC1Q96CG8 AL020989.1-201ENST00000422979 469 ntBASIC16.25■□□□□ 0.19
CTHRC1Q96CG8 AL450487.1-201ENST00000426799 995 ntBASIC16.25■□□□□ 0.19
CTHRC1Q96CG8 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.25■□□□□ 0.19
CTHRC1Q96CG8 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.25■□□□□ 0.19
CTHRC1Q96CG8 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CTHRC1Q96CG8 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.25■□□□□ 0.19
CTHRC1Q96CG8 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.25■□□□□ 0.19
CTHRC1Q96CG8 REXO1L6P-202ENST00000619970 1078 ntBASIC16.25■□□□□ 0.19
CTHRC1Q96CG8 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CTHRC1Q96CG8 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.25■□□□□ 0.19
CTHRC1Q96CG8 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.25■□□□□ 0.19
CTHRC1Q96CG8 AC148477.5-201ENST00000625164 1645 ntBASIC16.25■□□□□ 0.19
CTHRC1Q96CG8 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.25■□□□□ 0.19
CTHRC1Q96CG8 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.25■□□□□ 0.19
CTHRC1Q96CG8 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CTHRC1Q96CG8 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CTHRC1Q96CG8 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CTHRC1Q96CG8 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.24■□□□□ 0.19
CTHRC1Q96CG8 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CTHRC1Q96CG8 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
CTHRC1Q96CG8 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CTHRC1Q96CG8 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.24■□□□□ 0.19
CTHRC1Q96CG8 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CTHRC1Q96CG8 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CTHRC1Q96CG8 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.24■□□□□ 0.19
CTHRC1Q96CG8 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CTHRC1Q96CG8 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CTHRC1Q96CG8 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CTHRC1Q96CG8 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CTHRC1Q96CG8 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CTHRC1Q96CG8 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.24■□□□□ 0.19
CTHRC1Q96CG8 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CTHRC1Q96CG8 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms