Protein–RNA interactions for Protein: Q96BP2

CHCHD1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1Q96BP2 RNF216P1-203ENST00000404404 2427 ntBASIC12.81□□□□□ -0.36
CHCHD1Q96BP2 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CHCHD1Q96BP2 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
CHCHD1Q96BP2 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CHCHD1Q96BP2 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC12.81□□□□□ -0.36
CHCHD1Q96BP2 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
CHCHD1Q96BP2 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
CHCHD1Q96BP2 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC12.81□□□□□ -0.36
CHCHD1Q96BP2 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC12.81□□□□□ -0.36
CHCHD1Q96BP2 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CHCHD1Q96BP2 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
CHCHD1Q96BP2 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC12.81□□□□□ -0.36
CHCHD1Q96BP2 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CHCHD1Q96BP2 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CHCHD1Q96BP2 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CHCHD1Q96BP2 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CHCHD1Q96BP2 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CHCHD1Q96BP2 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CHCHD1Q96BP2 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC12.81□□□□□ -0.36
CHCHD1Q96BP2 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC12.81□□□□□ -0.36
CHCHD1Q96BP2 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
CHCHD1Q96BP2 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CHCHD1Q96BP2 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC12.81□□□□□ -0.36
CHCHD1Q96BP2 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC12.81□□□□□ -0.36
CHCHD1Q96BP2 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CHCHD1Q96BP2 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CHCHD1Q96BP2 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC12.81□□□□□ -0.36
CHCHD1Q96BP2 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC12.81□□□□□ -0.36
CHCHD1Q96BP2 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC12.81□□□□□ -0.36
CHCHD1Q96BP2 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CHCHD1Q96BP2 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CHCHD1Q96BP2 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CHCHD1Q96BP2 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CHCHD1Q96BP2 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CHCHD1Q96BP2 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CHCHD1Q96BP2 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CHCHD1Q96BP2 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
CHCHD1Q96BP2 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CHCHD1Q96BP2 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
CHCHD1Q96BP2 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CHCHD1Q96BP2 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CHCHD1Q96BP2 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC12.81□□□□□ -0.36
CHCHD1Q96BP2 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CHCHD1Q96BP2 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CHCHD1Q96BP2 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CHCHD1Q96BP2 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC12.8□□□□□ -0.36
CHCHD1Q96BP2 AL662844.4-201ENST00000606367 2838 ntBASIC12.8□□□□□ -0.36
CHCHD1Q96BP2 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CHCHD1Q96BP2 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CHCHD1Q96BP2 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CHCHD1Q96BP2 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CHCHD1Q96BP2 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC12.8□□□□□ -0.36
CHCHD1Q96BP2 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC12.8□□□□□ -0.36
CHCHD1Q96BP2 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CHCHD1Q96BP2 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC12.8□□□□□ -0.36
CHCHD1Q96BP2 AC092171.3-201ENST00000610122 2651 ntBASIC12.8□□□□□ -0.36
CHCHD1Q96BP2 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CHCHD1Q96BP2 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
CHCHD1Q96BP2 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CHCHD1Q96BP2 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CHCHD1Q96BP2 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
CHCHD1Q96BP2 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
CHCHD1Q96BP2 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
CHCHD1Q96BP2 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC12.8□□□□□ -0.36
CHCHD1Q96BP2 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC12.8□□□□□ -0.36
CHCHD1Q96BP2 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC12.8□□□□□ -0.36
CHCHD1Q96BP2 SUDS3P1-201ENST00000505831 966 ntBASIC12.8□□□□□ -0.36
CHCHD1Q96BP2 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC12.8□□□□□ -0.36
CHCHD1Q96BP2 SPI1-203ENST00000533030 661 ntTSL 2 BASIC12.8□□□□□ -0.36
CHCHD1Q96BP2 C1QL1P1-201ENST00000568105 661 ntBASIC12.8□□□□□ -0.36
CHCHD1Q96BP2 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CHCHD1Q96BP2 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CHCHD1Q96BP2 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC12.8□□□□□ -0.36
CHCHD1Q96BP2 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
CHCHD1Q96BP2 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CHCHD1Q96BP2 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CHCHD1Q96BP2 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CHCHD1Q96BP2 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC12.8□□□□□ -0.36
CHCHD1Q96BP2 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
CHCHD1Q96BP2 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
CHCHD1Q96BP2 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
CHCHD1Q96BP2 VILL-207ENST00000465644 1857 ntTSL 5 BASIC12.8□□□□□ -0.36
CHCHD1Q96BP2 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CHCHD1Q96BP2 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CHCHD1Q96BP2 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CHCHD1Q96BP2 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CHCHD1Q96BP2 MBP-202ENST00000355994 2772 ntTSL 5 BASIC12.8□□□□□ -0.36
CHCHD1Q96BP2 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CHCHD1Q96BP2 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
CHCHD1Q96BP2 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
CHCHD1Q96BP2 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CHCHD1Q96BP2 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CHCHD1Q96BP2 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
CHCHD1Q96BP2 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC12.79□□□□□ -0.36
CHCHD1Q96BP2 KRT8P9-201ENST00000558927 1449 ntBASIC12.79□□□□□ -0.36
CHCHD1Q96BP2 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC12.79□□□□□ -0.36
CHCHD1Q96BP2 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CHCHD1Q96BP2 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CHCHD1Q96BP2 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC12.79□□□□□ -0.36
CHCHD1Q96BP2 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms