Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
RAPGEF4Q8WZA2 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC22.91■■□□□ 1.26
RAPGEF4Q8WZA2 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC22.91■■□□□ 1.26
RAPGEF4Q8WZA2 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
RAPGEF4Q8WZA2 TSEN15P1-201ENST00000423257 515 ntBASIC22.91■■□□□ 1.26
RAPGEF4Q8WZA2 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
RAPGEF4Q8WZA2 MIR3197-201ENST00000582241 73 ntBASIC22.91■■□□□ 1.26
RAPGEF4Q8WZA2 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC22.91■■□□□ 1.26
RAPGEF4Q8WZA2 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
RAPGEF4Q8WZA2 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
RAPGEF4Q8WZA2 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
RAPGEF4Q8WZA2 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC22.91■■□□□ 1.26
RAPGEF4Q8WZA2 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
RAPGEF4Q8WZA2 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
RAPGEF4Q8WZA2 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
RAPGEF4Q8WZA2 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
RAPGEF4Q8WZA2 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
RAPGEF4Q8WZA2 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
RAPGEF4Q8WZA2 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC22.9■■□□□ 1.26
RAPGEF4Q8WZA2 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC22.9■■□□□ 1.26
RAPGEF4Q8WZA2 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
RAPGEF4Q8WZA2 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
RAPGEF4Q8WZA2 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
RAPGEF4Q8WZA2 STOM-202ENST00000347359 870 ntTSL 2 BASIC22.9■■□□□ 1.26
RAPGEF4Q8WZA2 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
RAPGEF4Q8WZA2 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC22.9■■□□□ 1.26
RAPGEF4Q8WZA2 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
RAPGEF4Q8WZA2 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC22.9■■□□□ 1.26
RAPGEF4Q8WZA2 AC092902.6-201ENST00000641783 218 ntBASIC22.9■■□□□ 1.26
RAPGEF4Q8WZA2 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC22.9■■□□□ 1.26
RAPGEF4Q8WZA2 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
RAPGEF4Q8WZA2 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC22.9■■□□□ 1.26
RAPGEF4Q8WZA2 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
RAPGEF4Q8WZA2 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC22.9■■□□□ 1.26
RAPGEF4Q8WZA2 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
RAPGEF4Q8WZA2 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
RAPGEF4Q8WZA2 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
RAPGEF4Q8WZA2 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC22.89■■□□□ 1.26
RAPGEF4Q8WZA2 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
RAPGEF4Q8WZA2 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
RAPGEF4Q8WZA2 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.26
RAPGEF4Q8WZA2 KRT18P55-202ENST00000578578 1546 ntBASIC22.89■■□□□ 1.26
RAPGEF4Q8WZA2 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
RAPGEF4Q8WZA2 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC22.89■■□□□ 1.26
RAPGEF4Q8WZA2 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC22.89■■□□□ 1.25
RAPGEF4Q8WZA2 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
RAPGEF4Q8WZA2 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
RAPGEF4Q8WZA2 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.25
RAPGEF4Q8WZA2 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
RAPGEF4Q8WZA2 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC22.89■■□□□ 1.25
RAPGEF4Q8WZA2 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC22.89■■□□□ 1.25
RAPGEF4Q8WZA2 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC22.89■■□□□ 1.25
RAPGEF4Q8WZA2 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC22.89■■□□□ 1.25
RAPGEF4Q8WZA2 AC068137.2-201ENST00000605408 478 ntBASIC22.89■■□□□ 1.25
RAPGEF4Q8WZA2 MED16-214ENST00000617672 554 ntTSL 5 BASIC22.89■■□□□ 1.25
RAPGEF4Q8WZA2 AC093028.1-201ENST00000622998 982 ntBASIC22.89■■□□□ 1.25
RAPGEF4Q8WZA2 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.25
RAPGEF4Q8WZA2 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC22.89■■□□□ 1.25
RAPGEF4Q8WZA2 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC22.89■■□□□ 1.25
RAPGEF4Q8WZA2 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
RAPGEF4Q8WZA2 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC22.89■■□□□ 1.25
RAPGEF4Q8WZA2 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC22.89■■□□□ 1.25
RAPGEF4Q8WZA2 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC22.88■■□□□ 1.25
RAPGEF4Q8WZA2 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC22.88■■□□□ 1.25
RAPGEF4Q8WZA2 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC22.88■■□□□ 1.25
RAPGEF4Q8WZA2 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
RAPGEF4Q8WZA2 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
RAPGEF4Q8WZA2 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC22.88■■□□□ 1.25
RAPGEF4Q8WZA2 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC22.88■■□□□ 1.25
RAPGEF4Q8WZA2 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC22.88■■□□□ 1.25
RAPGEF4Q8WZA2 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
RAPGEF4Q8WZA2 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC22.88■■□□□ 1.25
RAPGEF4Q8WZA2 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC22.88■■□□□ 1.25
RAPGEF4Q8WZA2 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC22.88■■□□□ 1.25
RAPGEF4Q8WZA2 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RAPGEF4Q8WZA2 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
RAPGEF4Q8WZA2 AL513210.1-201ENST00000629608 234 ntBASIC22.88■■□□□ 1.25
RAPGEF4Q8WZA2 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC22.88■■□□□ 1.25
RAPGEF4Q8WZA2 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC22.88■■□□□ 1.25
RAPGEF4Q8WZA2 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC22.88■■□□□ 1.25
RAPGEF4Q8WZA2 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RAPGEF4Q8WZA2 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
RAPGEF4Q8WZA2 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RAPGEF4Q8WZA2 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RAPGEF4Q8WZA2 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
RAPGEF4Q8WZA2 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
RAPGEF4Q8WZA2 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RAPGEF4Q8WZA2 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC22.87■■□□□ 1.25
RAPGEF4Q8WZA2 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC22.87■■□□□ 1.25
RAPGEF4Q8WZA2 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC22.87■■□□□ 1.25
RAPGEF4Q8WZA2 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RAPGEF4Q8WZA2 ENSA-206ENST00000361631 725 ntTSL 2 BASIC22.87■■□□□ 1.25
RAPGEF4Q8WZA2 NABP1-203ENST00000409510 843 ntTSL 5 BASIC22.87■■□□□ 1.25
RAPGEF4Q8WZA2 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC22.87■■□□□ 1.25
RAPGEF4Q8WZA2 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC22.87■■□□□ 1.25
RAPGEF4Q8WZA2 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC22.87■■□□□ 1.25
RAPGEF4Q8WZA2 FAM185BP-201ENST00000443595 716 ntBASIC22.87■■□□□ 1.25
RAPGEF4Q8WZA2 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC22.87■■□□□ 1.25
RAPGEF4Q8WZA2 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC22.87■■□□□ 1.25
RAPGEF4Q8WZA2 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms