Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.89■□□□□ 0.45
SHROOM3Q8TF72 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SHROOM3Q8TF72 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.89■□□□□ 0.45
SHROOM3Q8TF72 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SHROOM3Q8TF72 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SHROOM3Q8TF72 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SHROOM3Q8TF72 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SHROOM3Q8TF72 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SHROOM3Q8TF72 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.88■□□□□ 0.45
SHROOM3Q8TF72 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.88■□□□□ 0.45
SHROOM3Q8TF72 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SHROOM3Q8TF72 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SHROOM3Q8TF72 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SHROOM3Q8TF72 MIR574-201ENST00000385209 96 ntBASIC17.88■□□□□ 0.45
SHROOM3Q8TF72 MRPL3P1-201ENST00000400109 1033 ntBASIC17.88■□□□□ 0.45
SHROOM3Q8TF72 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.88■□□□□ 0.45
SHROOM3Q8TF72 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
SHROOM3Q8TF72 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.88■□□□□ 0.45
SHROOM3Q8TF72 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.88■□□□□ 0.45
SHROOM3Q8TF72 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.88■□□□□ 0.45
SHROOM3Q8TF72 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SHROOM3Q8TF72 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.88■□□□□ 0.45
SHROOM3Q8TF72 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
SHROOM3Q8TF72 AC079776.2-201ENST00000641154 1609 ntBASIC17.88■□□□□ 0.45
SHROOM3Q8TF72 AC106820.2-201ENST00000563775 3264 ntBASIC17.88■□□□□ 0.45
SHROOM3Q8TF72 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SHROOM3Q8TF72 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SHROOM3Q8TF72 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
SHROOM3Q8TF72 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.88■□□□□ 0.45
SHROOM3Q8TF72 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SHROOM3Q8TF72 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SHROOM3Q8TF72 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.88■□□□□ 0.45
SHROOM3Q8TF72 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
SHROOM3Q8TF72 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.88■□□□□ 0.45
SHROOM3Q8TF72 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SHROOM3Q8TF72 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SHROOM3Q8TF72 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.88■□□□□ 0.45
SHROOM3Q8TF72 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SHROOM3Q8TF72 AP002469.2-201ENST00000531724 424 ntBASIC17.88■□□□□ 0.45
SHROOM3Q8TF72 AL662844.1-201ENST00000546340 181 ntBASIC17.88■□□□□ 0.45
SHROOM3Q8TF72 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.88■□□□□ 0.45
SHROOM3Q8TF72 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SHROOM3Q8TF72 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SHROOM3Q8TF72 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.87■□□□□ 0.45
SHROOM3Q8TF72 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SHROOM3Q8TF72 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SHROOM3Q8TF72 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
SHROOM3Q8TF72 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.87■□□□□ 0.45
SHROOM3Q8TF72 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SHROOM3Q8TF72 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SHROOM3Q8TF72 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.87■□□□□ 0.45
SHROOM3Q8TF72 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SHROOM3Q8TF72 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
SHROOM3Q8TF72 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SHROOM3Q8TF72 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SHROOM3Q8TF72 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SHROOM3Q8TF72 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.87■□□□□ 0.45
SHROOM3Q8TF72 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.87■□□□□ 0.45
SHROOM3Q8TF72 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SHROOM3Q8TF72 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.87■□□□□ 0.45
SHROOM3Q8TF72 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SHROOM3Q8TF72 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.87■□□□□ 0.45
SHROOM3Q8TF72 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
SHROOM3Q8TF72 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
SHROOM3Q8TF72 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
SHROOM3Q8TF72 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SHROOM3Q8TF72 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SHROOM3Q8TF72 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.86■□□□□ 0.45
SHROOM3Q8TF72 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
SHROOM3Q8TF72 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SHROOM3Q8TF72 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
SHROOM3Q8TF72 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SHROOM3Q8TF72 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SHROOM3Q8TF72 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SHROOM3Q8TF72 IGHV3-52-201ENST00000519770 353 ntBASIC17.86■□□□□ 0.45
SHROOM3Q8TF72 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.86■□□□□ 0.45
SHROOM3Q8TF72 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.86■□□□□ 0.45
SHROOM3Q8TF72 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.86■□□□□ 0.45
SHROOM3Q8TF72 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SHROOM3Q8TF72 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.86■□□□□ 0.45
SHROOM3Q8TF72 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.86■□□□□ 0.45
SHROOM3Q8TF72 AF228730.7-201ENST00000641842 219 ntBASIC17.86■□□□□ 0.45
SHROOM3Q8TF72 AC009336.1-201ENST00000608941 1553 ntBASIC17.86■□□□□ 0.45
SHROOM3Q8TF72 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SHROOM3Q8TF72 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SHROOM3Q8TF72 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.86■□□□□ 0.45
SHROOM3Q8TF72 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SHROOM3Q8TF72 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SHROOM3Q8TF72 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SHROOM3Q8TF72 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.86■□□□□ 0.45
SHROOM3Q8TF72 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
SHROOM3Q8TF72 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
SHROOM3Q8TF72 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SHROOM3Q8TF72 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.86■□□□□ 0.45
SHROOM3Q8TF72 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SHROOM3Q8TF72 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SHROOM3Q8TF72 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SHROOM3Q8TF72 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.86■□□□□ 0.45
SHROOM3Q8TF72 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC17.86■□□□□ 0.45
SHROOM3Q8TF72 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms