Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC01006Q8NI28 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC01006Q8NI28 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LINC01006Q8NI28 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC01006Q8NI28 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LINC01006Q8NI28 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC01006Q8NI28 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC01006Q8NI28 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LINC01006Q8NI28 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC13.61□□□□□ -0.23
LINC01006Q8NI28 ACTG1P4-201ENST00000425123 1122 ntBASIC13.61□□□□□ -0.23
LINC01006Q8NI28 AL645939.2-201ENST00000427340 991 ntBASIC13.61□□□□□ -0.23
LINC01006Q8NI28 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC13.61□□□□□ -0.23
LINC01006Q8NI28 FAM58CP-201ENST00000435741 640 ntBASIC13.61□□□□□ -0.23
LINC01006Q8NI28 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC13.61□□□□□ -0.23
LINC01006Q8NI28 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC13.61□□□□□ -0.23
LINC01006Q8NI28 PUS1-205ENST00000535067 838 ntTSL 3 BASIC13.61□□□□□ -0.23
LINC01006Q8NI28 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC13.61□□□□□ -0.23
LINC01006Q8NI28 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC13.61□□□□□ -0.23
LINC01006Q8NI28 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC13.61□□□□□ -0.23
LINC01006Q8NI28 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC13.61□□□□□ -0.23
LINC01006Q8NI28 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC01006Q8NI28 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
LINC01006Q8NI28 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC13.61□□□□□ -0.23
LINC01006Q8NI28 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC01006Q8NI28 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC13.61□□□□□ -0.23
LINC01006Q8NI28 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC13.61□□□□□ -0.23
LINC01006Q8NI28 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LINC01006Q8NI28 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC01006Q8NI28 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC01006Q8NI28 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
LINC01006Q8NI28 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LINC01006Q8NI28 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC13.6□□□□□ -0.23
LINC01006Q8NI28 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC13.6□□□□□ -0.23
LINC01006Q8NI28 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC01006Q8NI28 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
LINC01006Q8NI28 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC13.6□□□□□ -0.23
LINC01006Q8NI28 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC13.6□□□□□ -0.23
LINC01006Q8NI28 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC01006Q8NI28 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC01006Q8NI28 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC01006Q8NI28 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC13.6□□□□□ -0.23
LINC01006Q8NI28 NEK7-201ENST00000367383 586 ntTSL 2 BASIC13.6□□□□□ -0.23
LINC01006Q8NI28 STK4-201ENST00000372801 2038 ntTSL 2 BASIC13.6□□□□□ -0.23
LINC01006Q8NI28 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC13.6□□□□□ -0.23
LINC01006Q8NI28 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC01006Q8NI28 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC13.6□□□□□ -0.23
LINC01006Q8NI28 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC01006Q8NI28 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC01006Q8NI28 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
LINC01006Q8NI28 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC13.6□□□□□ -0.23
LINC01006Q8NI28 CXCL1P1-201ENST00000502804 216 ntBASIC13.6□□□□□ -0.23
LINC01006Q8NI28 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC13.6□□□□□ -0.23
LINC01006Q8NI28 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC13.6□□□□□ -0.23
LINC01006Q8NI28 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC01006Q8NI28 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC13.6□□□□□ -0.23
LINC01006Q8NI28 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC01006Q8NI28 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC01006Q8NI28 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC13.6□□□□□ -0.23
LINC01006Q8NI28 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
LINC01006Q8NI28 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC13.6□□□□□ -0.23
LINC01006Q8NI28 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC01006Q8NI28 AC020763.4-201ENST00000623414 4170 ntBASIC13.6□□□□□ -0.23
LINC01006Q8NI28 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC01006Q8NI28 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC01006Q8NI28 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC01006Q8NI28 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
LINC01006Q8NI28 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC13.6□□□□□ -0.23
LINC01006Q8NI28 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC01006Q8NI28 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC01006Q8NI28 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC13.59□□□□□ -0.23
LINC01006Q8NI28 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC13.59□□□□□ -0.23
LINC01006Q8NI28 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LINC01006Q8NI28 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC13.59□□□□□ -0.23
LINC01006Q8NI28 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC01006Q8NI28 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC01006Q8NI28 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
LINC01006Q8NI28 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC13.59□□□□□ -0.23
LINC01006Q8NI28 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LINC01006Q8NI28 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC13.59□□□□□ -0.23
LINC01006Q8NI28 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC13.59□□□□□ -0.23
LINC01006Q8NI28 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC13.59□□□□□ -0.23
LINC01006Q8NI28 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC01006Q8NI28 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
LINC01006Q8NI28 PNMT-202ENST00000394246 821 ntTSL 2 BASIC13.59□□□□□ -0.23
LINC01006Q8NI28 DDT-204ENST00000404092 805 ntTSL 3 BASIC13.59□□□□□ -0.23
LINC01006Q8NI28 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC13.59□□□□□ -0.23
LINC01006Q8NI28 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC13.59□□□□□ -0.23
LINC01006Q8NI28 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC13.59□□□□□ -0.23
LINC01006Q8NI28 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
LINC01006Q8NI28 AP000344.2-201ENST00000512987 629 ntBASIC13.59□□□□□ -0.23
LINC01006Q8NI28 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC13.59□□□□□ -0.23
LINC01006Q8NI28 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC13.59□□□□□ -0.23
LINC01006Q8NI28 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC13.59□□□□□ -0.23
LINC01006Q8NI28 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC01006Q8NI28 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC13.59□□□□□ -0.23
LINC01006Q8NI28 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC13.59□□□□□ -0.23
LINC01006Q8NI28 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC13.59□□□□□ -0.23
LINC01006Q8NI28 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC01006Q8NI28 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
LINC01006Q8NI28 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms