Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.97■□□□□ 0.63
HERC6Q8IVU3 AC091812.2-201ENST00000619081 385 ntBASIC18.97■□□□□ 0.63
HERC6Q8IVU3 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
HERC6Q8IVU3 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
HERC6Q8IVU3 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HERC6Q8IVU3 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HERC6Q8IVU3 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HERC6Q8IVU3 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
HERC6Q8IVU3 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HERC6Q8IVU3 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HERC6Q8IVU3 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
HERC6Q8IVU3 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
HERC6Q8IVU3 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
HERC6Q8IVU3 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
HERC6Q8IVU3 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
HERC6Q8IVU3 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
HERC6Q8IVU3 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
HERC6Q8IVU3 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HERC6Q8IVU3 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
HERC6Q8IVU3 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
HERC6Q8IVU3 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HERC6Q8IVU3 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HERC6Q8IVU3 NEK7-201ENST00000367383 586 ntTSL 2 BASIC18.96■□□□□ 0.63
HERC6Q8IVU3 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HERC6Q8IVU3 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.96■□□□□ 0.63
HERC6Q8IVU3 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC18.96■□□□□ 0.63
HERC6Q8IVU3 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC18.96■□□□□ 0.63
HERC6Q8IVU3 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
HERC6Q8IVU3 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
HERC6Q8IVU3 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HERC6Q8IVU3 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HERC6Q8IVU3 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.62
HERC6Q8IVU3 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HERC6Q8IVU3 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HERC6Q8IVU3 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.95■□□□□ 0.62
HERC6Q8IVU3 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HERC6Q8IVU3 AC138932.1-201ENST00000534164 6830 ntBASIC18.95■□□□□ 0.62
HERC6Q8IVU3 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HERC6Q8IVU3 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HERC6Q8IVU3 PTCHD3P3-201ENST00000403073 906 ntBASIC18.95■□□□□ 0.62
HERC6Q8IVU3 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HERC6Q8IVU3 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC18.95■□□□□ 0.62
HERC6Q8IVU3 AC092474.2-201ENST00000424288 719 ntBASIC18.95■□□□□ 0.62
HERC6Q8IVU3 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HERC6Q8IVU3 WBP2-203ENST00000433525 928 ntTSL 2 BASIC18.95■□□□□ 0.62
HERC6Q8IVU3 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC18.95■□□□□ 0.62
HERC6Q8IVU3 GREM1-201ENST00000560677 623 ntTSL 4 BASIC18.95■□□□□ 0.62
HERC6Q8IVU3 OR7E47P-204ENST00000575924 449 ntBASIC18.95■□□□□ 0.62
HERC6Q8IVU3 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.95■□□□□ 0.62
HERC6Q8IVU3 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HERC6Q8IVU3 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HERC6Q8IVU3 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HERC6Q8IVU3 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
HERC6Q8IVU3 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.95■□□□□ 0.62
HERC6Q8IVU3 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HERC6Q8IVU3 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HERC6Q8IVU3 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HERC6Q8IVU3 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HERC6Q8IVU3 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HERC6Q8IVU3 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HERC6Q8IVU3 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
HERC6Q8IVU3 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HERC6Q8IVU3 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HERC6Q8IVU3 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC18.94■□□□□ 0.62
HERC6Q8IVU3 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
HERC6Q8IVU3 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HERC6Q8IVU3 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC18.94■□□□□ 0.62
HERC6Q8IVU3 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
HERC6Q8IVU3 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.94■□□□□ 0.62
HERC6Q8IVU3 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HERC6Q8IVU3 AC004461.1-201ENST00000412461 403 ntBASIC18.94■□□□□ 0.62
HERC6Q8IVU3 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HERC6Q8IVU3 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
HERC6Q8IVU3 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC18.94■□□□□ 0.62
HERC6Q8IVU3 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HERC6Q8IVU3 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC18.94■□□□□ 0.62
HERC6Q8IVU3 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC18.94■□□□□ 0.62
HERC6Q8IVU3 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
HERC6Q8IVU3 AC023141.13-201ENST00000604991 943 ntBASIC18.94■□□□□ 0.62
HERC6Q8IVU3 GGTLC5P-201ENST00000617623 998 ntBASIC18.94■□□□□ 0.62
HERC6Q8IVU3 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC18.94■□□□□ 0.62
HERC6Q8IVU3 AC007064.4-201ENST00000637740 555 ntBASIC18.94■□□□□ 0.62
HERC6Q8IVU3 AC092902.6-201ENST00000641783 218 ntBASIC18.94■□□□□ 0.62
HERC6Q8IVU3 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HERC6Q8IVU3 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HERC6Q8IVU3 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
HERC6Q8IVU3 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
HERC6Q8IVU3 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HERC6Q8IVU3 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HERC6Q8IVU3 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
HERC6Q8IVU3 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
HERC6Q8IVU3 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HERC6Q8IVU3 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HERC6Q8IVU3 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
HERC6Q8IVU3 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HERC6Q8IVU3 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.93■□□□□ 0.62
HERC6Q8IVU3 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.93■□□□□ 0.62
HERC6Q8IVU3 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.93■□□□□ 0.62
HERC6Q8IVU3 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HERC6Q8IVU3 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms