Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.47■□□□□ 0.07
LYSMD2Q8IV50 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
LYSMD2Q8IV50 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LYSMD2Q8IV50 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC15.47■□□□□ 0.07
LYSMD2Q8IV50 AL109659.2-201ENST00000606809 1674 ntBASIC15.47■□□□□ 0.07
LYSMD2Q8IV50 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LYSMD2Q8IV50 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LYSMD2Q8IV50 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LYSMD2Q8IV50 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
LYSMD2Q8IV50 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LYSMD2Q8IV50 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LYSMD2Q8IV50 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LYSMD2Q8IV50 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.47■□□□□ 0.07
LYSMD2Q8IV50 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LYSMD2Q8IV50 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.46■□□□□ 0.07
LYSMD2Q8IV50 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
LYSMD2Q8IV50 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LYSMD2Q8IV50 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
LYSMD2Q8IV50 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
LYSMD2Q8IV50 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LYSMD2Q8IV50 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LYSMD2Q8IV50 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC15.46■□□□□ 0.07
LYSMD2Q8IV50 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
LYSMD2Q8IV50 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
LYSMD2Q8IV50 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
LYSMD2Q8IV50 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LYSMD2Q8IV50 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.46■□□□□ 0.07
LYSMD2Q8IV50 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LYSMD2Q8IV50 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
LYSMD2Q8IV50 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LYSMD2Q8IV50 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
LYSMD2Q8IV50 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LYSMD2Q8IV50 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
LYSMD2Q8IV50 DERL1-203ENST00000419562 918 ntTSL 2 BASIC15.46■□□□□ 0.07
LYSMD2Q8IV50 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC15.46■□□□□ 0.07
LYSMD2Q8IV50 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.46■□□□□ 0.07
LYSMD2Q8IV50 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
LYSMD2Q8IV50 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
LYSMD2Q8IV50 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC15.46■□□□□ 0.07
LYSMD2Q8IV50 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
LYSMD2Q8IV50 LINC01451-201ENST00000623792 534 ntBASIC15.46■□□□□ 0.07
LYSMD2Q8IV50 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LYSMD2Q8IV50 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.46■□□□□ 0.07
LYSMD2Q8IV50 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
LYSMD2Q8IV50 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC15.46■□□□□ 0.07
LYSMD2Q8IV50 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LYSMD2Q8IV50 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
LYSMD2Q8IV50 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
LYSMD2Q8IV50 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LYSMD2Q8IV50 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC15.46■□□□□ 0.06
LYSMD2Q8IV50 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.46■□□□□ 0.06
LYSMD2Q8IV50 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.46■□□□□ 0.06
LYSMD2Q8IV50 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
LYSMD2Q8IV50 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
LYSMD2Q8IV50 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.06
LYSMD2Q8IV50 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
LYSMD2Q8IV50 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
LYSMD2Q8IV50 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
LYSMD2Q8IV50 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
LYSMD2Q8IV50 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
LYSMD2Q8IV50 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC15.45■□□□□ 0.06
LYSMD2Q8IV50 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LYSMD2Q8IV50 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LYSMD2Q8IV50 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LYSMD2Q8IV50 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
LYSMD2Q8IV50 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LYSMD2Q8IV50 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC15.45■□□□□ 0.06
LYSMD2Q8IV50 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
LYSMD2Q8IV50 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LYSMD2Q8IV50 AC016396.2-201ENST00000562575 1417 ntBASIC15.45■□□□□ 0.06
LYSMD2Q8IV50 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
LYSMD2Q8IV50 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
LYSMD2Q8IV50 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.45■□□□□ 0.06
LYSMD2Q8IV50 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.45■□□□□ 0.06
LYSMD2Q8IV50 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
LYSMD2Q8IV50 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LYSMD2Q8IV50 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LYSMD2Q8IV50 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LYSMD2Q8IV50 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
LYSMD2Q8IV50 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC15.45■□□□□ 0.06
LYSMD2Q8IV50 WT1-AS_3.1-201ENST00000613262 234 ntBASIC15.45■□□□□ 0.06
LYSMD2Q8IV50 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
LYSMD2Q8IV50 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
LYSMD2Q8IV50 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.45■□□□□ 0.06
LYSMD2Q8IV50 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.45■□□□□ 0.06
LYSMD2Q8IV50 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC15.45■□□□□ 0.06
LYSMD2Q8IV50 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LYSMD2Q8IV50 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.45■□□□□ 0.06
LYSMD2Q8IV50 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LYSMD2Q8IV50 UROS-202ENST00000368778 1556 ntTSL 2 BASIC15.45■□□□□ 0.06
LYSMD2Q8IV50 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
LYSMD2Q8IV50 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
LYSMD2Q8IV50 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
LYSMD2Q8IV50 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
LYSMD2Q8IV50 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LYSMD2Q8IV50 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC15.44■□□□□ 0.06
LYSMD2Q8IV50 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.44■□□□□ 0.06
LYSMD2Q8IV50 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
LYSMD2Q8IV50 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC15.44■□□□□ 0.06
LYSMD2Q8IV50 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms