Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
ZNF546Q86UE3 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ZNF546Q86UE3 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC14.65□□□□□ -0.06
ZNF546Q86UE3 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ZNF546Q86UE3 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ZNF546Q86UE3 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ZNF546Q86UE3 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
ZNF546Q86UE3 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ZNF546Q86UE3 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ZNF546Q86UE3 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
ZNF546Q86UE3 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC14.65□□□□□ -0.06
ZNF546Q86UE3 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ZNF546Q86UE3 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
ZNF546Q86UE3 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.65□□□□□ -0.06
ZNF546Q86UE3 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ZNF546Q86UE3 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ZNF546Q86UE3 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ZNF546Q86UE3 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ZNF546Q86UE3 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC14.65□□□□□ -0.06
ZNF546Q86UE3 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC14.65□□□□□ -0.06
ZNF546Q86UE3 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC14.65□□□□□ -0.06
ZNF546Q86UE3 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ZNF546Q86UE3 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC14.65□□□□□ -0.06
ZNF546Q86UE3 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ZNF546Q86UE3 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC14.65□□□□□ -0.06
ZNF546Q86UE3 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ZNF546Q86UE3 LINC01451-201ENST00000623792 534 ntBASIC14.65□□□□□ -0.06
ZNF546Q86UE3 PFKL-212ENST00000628044 129 ntTSL 3 BASIC14.65□□□□□ -0.06
ZNF546Q86UE3 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
ZNF546Q86UE3 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ZNF546Q86UE3 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
ZNF546Q86UE3 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
ZNF546Q86UE3 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.65□□□□□ -0.06
ZNF546Q86UE3 AL136379.1-201ENST00000623471 2642 ntBASIC14.65□□□□□ -0.06
ZNF546Q86UE3 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ZNF546Q86UE3 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.65□□□□□ -0.06
ZNF546Q86UE3 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
ZNF546Q86UE3 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.65□□□□□ -0.06
ZNF546Q86UE3 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.65□□□□□ -0.06
ZNF546Q86UE3 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
ZNF546Q86UE3 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
ZNF546Q86UE3 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
ZNF546Q86UE3 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC14.65□□□□□ -0.06
ZNF546Q86UE3 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC14.65□□□□□ -0.06
ZNF546Q86UE3 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
ZNF546Q86UE3 UROS-202ENST00000368778 1556 ntTSL 2 BASIC14.64□□□□□ -0.07
ZNF546Q86UE3 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC14.64□□□□□ -0.07
ZNF546Q86UE3 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
ZNF546Q86UE3 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
ZNF546Q86UE3 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ZNF546Q86UE3 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
ZNF546Q86UE3 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
ZNF546Q86UE3 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC14.64□□□□□ -0.07
ZNF546Q86UE3 AC009102.3-201ENST00000623118 1491 ntBASIC14.64□□□□□ -0.07
ZNF546Q86UE3 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
ZNF546Q86UE3 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ZNF546Q86UE3 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ZNF546Q86UE3 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ZNF546Q86UE3 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ZNF546Q86UE3 AC100803.2-201ENST00000562459 1963 ntBASIC14.64□□□□□ -0.07
ZNF546Q86UE3 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ZNF546Q86UE3 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ZNF546Q86UE3 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.64□□□□□ -0.07
ZNF546Q86UE3 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
ZNF546Q86UE3 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
ZNF546Q86UE3 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC14.64□□□□□ -0.07
ZNF546Q86UE3 TK2-208ENST00000545043 1120 ntTSL 2 BASIC14.64□□□□□ -0.07
ZNF546Q86UE3 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC14.64□□□□□ -0.07
ZNF546Q86UE3 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
ZNF546Q86UE3 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
ZNF546Q86UE3 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
ZNF546Q86UE3 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ZNF546Q86UE3 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
ZNF546Q86UE3 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ZNF546Q86UE3 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
ZNF546Q86UE3 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ZNF546Q86UE3 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
ZNF546Q86UE3 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
ZNF546Q86UE3 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
ZNF546Q86UE3 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ZNF546Q86UE3 NBPF21P-201ENST00000425093 1451 ntBASIC14.63□□□□□ -0.07
ZNF546Q86UE3 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ZNF546Q86UE3 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
ZNF546Q86UE3 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
ZNF546Q86UE3 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ZNF546Q86UE3 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ZNF546Q86UE3 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
ZNF546Q86UE3 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC14.63□□□□□ -0.07
ZNF546Q86UE3 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ZNF546Q86UE3 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ZNF546Q86UE3 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ZNF546Q86UE3 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
ZNF546Q86UE3 MIR564-202ENST00000385049 94 ntBASIC14.63□□□□□ -0.07
ZNF546Q86UE3 VPS53-216ENST00000574029 585 ntTSL 4 BASIC14.63□□□□□ -0.07
ZNF546Q86UE3 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.63□□□□□ -0.07
ZNF546Q86UE3 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ZNF546Q86UE3 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
ZNF546Q86UE3 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ZNF546Q86UE3 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC14.63□□□□□ -0.07
ZNF546Q86UE3 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms