Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 AL023806.1-201ENST00000603994 1649 ntBASIC17.56■□□□□ 0.4
LDB1Q86U70 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
LDB1Q86U70 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.56■□□□□ 0.4
LDB1Q86U70 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LDB1Q86U70 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
LDB1Q86U70 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.56■□□□□ 0.4
LDB1Q86U70 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
LDB1Q86U70 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.56■□□□□ 0.4
LDB1Q86U70 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LDB1Q86U70 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LDB1Q86U70 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
LDB1Q86U70 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.55■□□□□ 0.4
LDB1Q86U70 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
LDB1Q86U70 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.55■□□□□ 0.4
LDB1Q86U70 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
LDB1Q86U70 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LDB1Q86U70 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
LDB1Q86U70 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
LDB1Q86U70 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
LDB1Q86U70 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
LDB1Q86U70 COX5BP2-201ENST00000392354 334 ntBASIC17.55■□□□□ 0.4
LDB1Q86U70 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LDB1Q86U70 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.55■□□□□ 0.4
LDB1Q86U70 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LDB1Q86U70 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
LDB1Q86U70 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
LDB1Q86U70 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
LDB1Q86U70 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
LDB1Q86U70 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LDB1Q86U70 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LDB1Q86U70 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LDB1Q86U70 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LDB1Q86U70 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.55■□□□□ 0.4
LDB1Q86U70 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.55■□□□□ 0.4
LDB1Q86U70 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
LDB1Q86U70 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
LDB1Q86U70 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
LDB1Q86U70 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LDB1Q86U70 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.55■□□□□ 0.4
LDB1Q86U70 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.55■□□□□ 0.4
LDB1Q86U70 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
LDB1Q86U70 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.54■□□□□ 0.4
LDB1Q86U70 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
LDB1Q86U70 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.54■□□□□ 0.4
LDB1Q86U70 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
LDB1Q86U70 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LDB1Q86U70 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LDB1Q86U70 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LDB1Q86U70 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.54■□□□□ 0.4
LDB1Q86U70 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
LDB1Q86U70 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
LDB1Q86U70 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LDB1Q86U70 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.54■□□□□ 0.4
LDB1Q86U70 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.54■□□□□ 0.4
LDB1Q86U70 AC005104.2-201ENST00000427818 678 ntBASIC17.54■□□□□ 0.4
LDB1Q86U70 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LDB1Q86U70 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.54■□□□□ 0.4
LDB1Q86U70 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.54■□□□□ 0.4
LDB1Q86U70 TPSP2-201ENST00000561760 610 ntBASIC17.54■□□□□ 0.4
LDB1Q86U70 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.54■□□□□ 0.4
LDB1Q86U70 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.54■□□□□ 0.4
LDB1Q86U70 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
LDB1Q86U70 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.54■□□□□ 0.4
LDB1Q86U70 PKD1P1-201ENST00000458669 6805 ntBASIC17.54■□□□□ 0.4
LDB1Q86U70 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LDB1Q86U70 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LDB1Q86U70 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LDB1Q86U70 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
LDB1Q86U70 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.54■□□□□ 0.4
LDB1Q86U70 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
LDB1Q86U70 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LDB1Q86U70 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LDB1Q86U70 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LDB1Q86U70 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
LDB1Q86U70 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
LDB1Q86U70 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
LDB1Q86U70 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.54■□□□□ 0.4
LDB1Q86U70 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
LDB1Q86U70 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LDB1Q86U70 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LDB1Q86U70 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LDB1Q86U70 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.53■□□□□ 0.4
LDB1Q86U70 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LDB1Q86U70 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.53■□□□□ 0.4
LDB1Q86U70 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LDB1Q86U70 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
LDB1Q86U70 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.53■□□□□ 0.4
LDB1Q86U70 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
LDB1Q86U70 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
LDB1Q86U70 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LDB1Q86U70 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LDB1Q86U70 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.53■□□□□ 0.4
LDB1Q86U70 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.53■□□□□ 0.4
LDB1Q86U70 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LDB1Q86U70 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.53■□□□□ 0.4
LDB1Q86U70 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LDB1Q86U70 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LDB1Q86U70 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
LDB1Q86U70 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
LDB1Q86U70 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms