Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
SHFQ7M4L6 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC15.93■□□□□ 0.14
SHFQ7M4L6 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC15.93■□□□□ 0.14
SHFQ7M4L6 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
SHFQ7M4L6 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SHFQ7M4L6 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
SHFQ7M4L6 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SHFQ7M4L6 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SHFQ7M4L6 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SHFQ7M4L6 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SHFQ7M4L6 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC15.92■□□□□ 0.14
SHFQ7M4L6 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC15.92■□□□□ 0.14
SHFQ7M4L6 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SHFQ7M4L6 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SHFQ7M4L6 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SHFQ7M4L6 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SHFQ7M4L6 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
SHFQ7M4L6 CRAT-202ENST00000393384 973 ntTSL 2 BASIC15.92■□□□□ 0.14
SHFQ7M4L6 PVRIG2P-201ENST00000435460 978 ntBASIC15.92■□□□□ 0.14
SHFQ7M4L6 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC15.92■□□□□ 0.14
SHFQ7M4L6 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC15.92■□□□□ 0.14
SHFQ7M4L6 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC15.92■□□□□ 0.14
SHFQ7M4L6 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC15.92■□□□□ 0.14
SHFQ7M4L6 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC15.92■□□□□ 0.14
SHFQ7M4L6 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC15.92■□□□□ 0.14
SHFQ7M4L6 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC15.92■□□□□ 0.14
SHFQ7M4L6 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC15.92■□□□□ 0.14
SHFQ7M4L6 AC116407.2-201ENST00000613639 860 ntBASIC15.92■□□□□ 0.14
SHFQ7M4L6 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC15.92■□□□□ 0.14
SHFQ7M4L6 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SHFQ7M4L6 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SHFQ7M4L6 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SHFQ7M4L6 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SHFQ7M4L6 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SHFQ7M4L6 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SHFQ7M4L6 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.92■□□□□ 0.14
SHFQ7M4L6 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SHFQ7M4L6 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SHFQ7M4L6 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.92■□□□□ 0.14
SHFQ7M4L6 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SHFQ7M4L6 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SHFQ7M4L6 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SHFQ7M4L6 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC15.92■□□□□ 0.14
SHFQ7M4L6 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SHFQ7M4L6 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
SHFQ7M4L6 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SHFQ7M4L6 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.92■□□□□ 0.14
SHFQ7M4L6 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SHFQ7M4L6 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
SHFQ7M4L6 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SHFQ7M4L6 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
SHFQ7M4L6 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SHFQ7M4L6 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SHFQ7M4L6 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
SHFQ7M4L6 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHFQ7M4L6 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
SHFQ7M4L6 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SHFQ7M4L6 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
SHFQ7M4L6 PBK-203ENST00000522944 1499 ntTSL 2 BASIC15.91■□□□□ 0.14
SHFQ7M4L6 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
SHFQ7M4L6 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
SHFQ7M4L6 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHFQ7M4L6 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.91■□□□□ 0.14
SHFQ7M4L6 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC15.91■□□□□ 0.14
SHFQ7M4L6 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
SHFQ7M4L6 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC15.91■□□□□ 0.14
SHFQ7M4L6 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHFQ7M4L6 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHFQ7M4L6 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHFQ7M4L6 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHFQ7M4L6 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHFQ7M4L6 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHFQ7M4L6 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC15.91■□□□□ 0.14
SHFQ7M4L6 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC15.91■□□□□ 0.14
SHFQ7M4L6 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHFQ7M4L6 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
SHFQ7M4L6 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
SHFQ7M4L6 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SHFQ7M4L6 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
SHFQ7M4L6 AC105020.1-201ENST00000435356 2205 ntBASIC15.91■□□□□ 0.14
SHFQ7M4L6 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHFQ7M4L6 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHFQ7M4L6 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC15.91■□□□□ 0.14
SHFQ7M4L6 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC15.91■□□□□ 0.14
SHFQ7M4L6 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHFQ7M4L6 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
SHFQ7M4L6 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHFQ7M4L6 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.91■□□□□ 0.14
SHFQ7M4L6 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
SHFQ7M4L6 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SHFQ7M4L6 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
SHFQ7M4L6 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
SHFQ7M4L6 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SHFQ7M4L6 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
SHFQ7M4L6 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.9■□□□□ 0.14
SHFQ7M4L6 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SHFQ7M4L6 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SHFQ7M4L6 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SHFQ7M4L6 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SHFQ7M4L6 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms