Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
RTL4Q6ZR62 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
RTL4Q6ZR62 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
RTL4Q6ZR62 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
RTL4Q6ZR62 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RTL4Q6ZR62 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
RTL4Q6ZR62 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RTL4Q6ZR62 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RTL4Q6ZR62 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
RTL4Q6ZR62 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RTL4Q6ZR62 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RTL4Q6ZR62 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.51■□□□□ 0.23
RTL4Q6ZR62 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.51■□□□□ 0.23
RTL4Q6ZR62 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RTL4Q6ZR62 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.51■□□□□ 0.23
RTL4Q6ZR62 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RTL4Q6ZR62 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
RTL4Q6ZR62 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.51■□□□□ 0.23
RTL4Q6ZR62 TPM4P1-201ENST00000436100 807 ntBASIC16.51■□□□□ 0.23
RTL4Q6ZR62 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RTL4Q6ZR62 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
RTL4Q6ZR62 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.51■□□□□ 0.23
RTL4Q6ZR62 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.51■□□□□ 0.23
RTL4Q6ZR62 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.51■□□□□ 0.23
RTL4Q6ZR62 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RTL4Q6ZR62 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RTL4Q6ZR62 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.51■□□□□ 0.23
RTL4Q6ZR62 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
RTL4Q6ZR62 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RTL4Q6ZR62 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RTL4Q6ZR62 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.51■□□□□ 0.23
RTL4Q6ZR62 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RTL4Q6ZR62 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
RTL4Q6ZR62 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RTL4Q6ZR62 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RTL4Q6ZR62 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
RTL4Q6ZR62 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RTL4Q6ZR62 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.51■□□□□ 0.23
RTL4Q6ZR62 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RTL4Q6ZR62 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RTL4Q6ZR62 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RTL4Q6ZR62 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RTL4Q6ZR62 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
RTL4Q6ZR62 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
RTL4Q6ZR62 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RTL4Q6ZR62 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RTL4Q6ZR62 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RTL4Q6ZR62 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.5■□□□□ 0.23
RTL4Q6ZR62 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RTL4Q6ZR62 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RTL4Q6ZR62 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RTL4Q6ZR62 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RTL4Q6ZR62 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.5■□□□□ 0.23
RTL4Q6ZR62 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RTL4Q6ZR62 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RTL4Q6ZR62 AC093010.1-201ENST00000473625 1624 ntBASIC16.5■□□□□ 0.23
RTL4Q6ZR62 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RTL4Q6ZR62 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RTL4Q6ZR62 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RTL4Q6ZR62 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
RTL4Q6ZR62 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RTL4Q6ZR62 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RTL4Q6ZR62 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RTL4Q6ZR62 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
RTL4Q6ZR62 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.5■□□□□ 0.23
RTL4Q6ZR62 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.5■□□□□ 0.23
RTL4Q6ZR62 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.5■□□□□ 0.23
RTL4Q6ZR62 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RTL4Q6ZR62 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.5■□□□□ 0.23
RTL4Q6ZR62 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
RTL4Q6ZR62 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
RTL4Q6ZR62 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RTL4Q6ZR62 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.5■□□□□ 0.23
RTL4Q6ZR62 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.5■□□□□ 0.23
RTL4Q6ZR62 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RTL4Q6ZR62 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.5■□□□□ 0.23
RTL4Q6ZR62 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RTL4Q6ZR62 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.5■□□□□ 0.23
RTL4Q6ZR62 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
RTL4Q6ZR62 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
RTL4Q6ZR62 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RTL4Q6ZR62 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.5■□□□□ 0.23
RTL4Q6ZR62 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RTL4Q6ZR62 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.5■□□□□ 0.23
RTL4Q6ZR62 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RTL4Q6ZR62 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.5■□□□□ 0.23
RTL4Q6ZR62 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.5■□□□□ 0.23
RTL4Q6ZR62 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RTL4Q6ZR62 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
RTL4Q6ZR62 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RTL4Q6ZR62 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RTL4Q6ZR62 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RTL4Q6ZR62 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
RTL4Q6ZR62 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.49■□□□□ 0.23
RTL4Q6ZR62 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.49■□□□□ 0.23
RTL4Q6ZR62 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RTL4Q6ZR62 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.49■□□□□ 0.23
RTL4Q6ZR62 POM121L3P-201ENST00000419331 1163 ntBASIC16.49■□□□□ 0.23
RTL4Q6ZR62 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.49■□□□□ 0.23
RTL4Q6ZR62 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms