Protein–RNA interactions for Protein: Q6ZMN8

CCNI2, Cyclin-I2, humanhuman

Predicted RBP Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNI2Q6ZMN8 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC18.67■□□□□ 0.58
CCNI2Q6ZMN8 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCNI2Q6ZMN8 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCNI2Q6ZMN8 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.67■□□□□ 0.58
CCNI2Q6ZMN8 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCNI2Q6ZMN8 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCNI2Q6ZMN8 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CCNI2Q6ZMN8 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCNI2Q6ZMN8 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CCNI2Q6ZMN8 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.67■□□□□ 0.58
CCNI2Q6ZMN8 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.67■□□□□ 0.58
CCNI2Q6ZMN8 AL023973.1-201ENST00000624619 620 ntBASIC18.67■□□□□ 0.58
CCNI2Q6ZMN8 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.67■□□□□ 0.58
CCNI2Q6ZMN8 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CCNI2Q6ZMN8 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCNI2Q6ZMN8 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCNI2Q6ZMN8 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC18.67■□□□□ 0.58
CCNI2Q6ZMN8 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCNI2Q6ZMN8 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCNI2Q6ZMN8 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCNI2Q6ZMN8 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCNI2Q6ZMN8 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCNI2Q6ZMN8 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CCNI2Q6ZMN8 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCNI2Q6ZMN8 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCNI2Q6ZMN8 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCNI2Q6ZMN8 HLA-J-201ENST00000462773 1622 ntBASIC18.67■□□□□ 0.58
CCNI2Q6ZMN8 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
CCNI2Q6ZMN8 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CCNI2Q6ZMN8 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
CCNI2Q6ZMN8 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCNI2Q6ZMN8 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCNI2Q6ZMN8 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCNI2Q6ZMN8 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCNI2Q6ZMN8 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCNI2Q6ZMN8 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.66■□□□□ 0.58
CCNI2Q6ZMN8 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CCNI2Q6ZMN8 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCNI2Q6ZMN8 FLJ38576-201ENST00000623820 2459 ntBASIC18.66■□□□□ 0.58
CCNI2Q6ZMN8 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC18.66■□□□□ 0.58
CCNI2Q6ZMN8 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCNI2Q6ZMN8 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCNI2Q6ZMN8 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCNI2Q6ZMN8 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CCNI2Q6ZMN8 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.66■□□□□ 0.58
CCNI2Q6ZMN8 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCNI2Q6ZMN8 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
CCNI2Q6ZMN8 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCNI2Q6ZMN8 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCNI2Q6ZMN8 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCNI2Q6ZMN8 ATP5G2P1-201ENST00000433580 426 ntBASIC18.66■□□□□ 0.58
CCNI2Q6ZMN8 KRT18P38-201ENST00000449496 1282 ntBASIC18.66■□□□□ 0.58
CCNI2Q6ZMN8 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCNI2Q6ZMN8 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.66■□□□□ 0.58
CCNI2Q6ZMN8 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCNI2Q6ZMN8 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC18.66■□□□□ 0.58
CCNI2Q6ZMN8 KLK8-205ENST00000593490 267 ntTSL 3 BASIC18.66■□□□□ 0.58
CCNI2Q6ZMN8 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.66■□□□□ 0.58
CCNI2Q6ZMN8 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCNI2Q6ZMN8 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCNI2Q6ZMN8 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCNI2Q6ZMN8 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CCNI2Q6ZMN8 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCNI2Q6ZMN8 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCNI2Q6ZMN8 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
CCNI2Q6ZMN8 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCNI2Q6ZMN8 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCNI2Q6ZMN8 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCNI2Q6ZMN8 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCNI2Q6ZMN8 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCNI2Q6ZMN8 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCNI2Q6ZMN8 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CCNI2Q6ZMN8 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
CCNI2Q6ZMN8 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC18.65■□□□□ 0.58
CCNI2Q6ZMN8 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCNI2Q6ZMN8 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCNI2Q6ZMN8 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.65■□□□□ 0.58
CCNI2Q6ZMN8 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.65■□□□□ 0.58
CCNI2Q6ZMN8 FDX1P1-201ENST00000449115 551 ntBASIC18.65■□□□□ 0.58
CCNI2Q6ZMN8 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.65■□□□□ 0.58
CCNI2Q6ZMN8 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.65■□□□□ 0.58
CCNI2Q6ZMN8 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.65■□□□□ 0.58
CCNI2Q6ZMN8 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.65■□□□□ 0.58
CCNI2Q6ZMN8 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCNI2Q6ZMN8 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC18.65■□□□□ 0.58
CCNI2Q6ZMN8 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC18.65■□□□□ 0.58
CCNI2Q6ZMN8 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCNI2Q6ZMN8 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CCNI2Q6ZMN8 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCNI2Q6ZMN8 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCNI2Q6ZMN8 CA12-203ENST00000422263 2556 ntTSL 2 BASIC18.65■□□□□ 0.58
CCNI2Q6ZMN8 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCNI2Q6ZMN8 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCNI2Q6ZMN8 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC18.65■□□□□ 0.58
CCNI2Q6ZMN8 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CCNI2Q6ZMN8 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.65■□□□□ 0.58
CCNI2Q6ZMN8 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.58
CCNI2Q6ZMN8 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.64■□□□□ 0.58
CCNI2Q6ZMN8 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC18.64■□□□□ 0.57
CCNI2Q6ZMN8 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms