Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF43Q68DV7 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RNF43Q68DV7 AC112698.1-201ENST00000510299 916 ntBASIC18.45■□□□□ 0.54
RNF43Q68DV7 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
RNF43Q68DV7 AC092865.5-201ENST00000545435 363 ntBASIC18.45■□□□□ 0.54
RNF43Q68DV7 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RNF43Q68DV7 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
RNF43Q68DV7 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF43Q68DV7 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RNF43Q68DV7 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
RNF43Q68DV7 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF43Q68DV7 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
RNF43Q68DV7 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
RNF43Q68DV7 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
RNF43Q68DV7 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.45■□□□□ 0.54
RNF43Q68DV7 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF43Q68DV7 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF43Q68DV7 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF43Q68DV7 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF43Q68DV7 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RNF43Q68DV7 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF43Q68DV7 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF43Q68DV7 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF43Q68DV7 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
RNF43Q68DV7 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF43Q68DV7 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF43Q68DV7 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RNF43Q68DV7 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RNF43Q68DV7 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF43Q68DV7 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RNF43Q68DV7 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RNF43Q68DV7 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.44■□□□□ 0.54
RNF43Q68DV7 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF43Q68DV7 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RNF43Q68DV7 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF43Q68DV7 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF43Q68DV7 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.44■□□□□ 0.54
RNF43Q68DV7 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC18.44■□□□□ 0.54
RNF43Q68DV7 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF43Q68DV7 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.44■□□□□ 0.54
RNF43Q68DV7 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.44■□□□□ 0.54
RNF43Q68DV7 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.44■□□□□ 0.54
RNF43Q68DV7 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.44■□□□□ 0.54
RNF43Q68DV7 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF43Q68DV7 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
RNF43Q68DV7 AD000864.1-201ENST00000624076 2295 ntBASIC18.44■□□□□ 0.54
RNF43Q68DV7 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
RNF43Q68DV7 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF43Q68DV7 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF43Q68DV7 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF43Q68DV7 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF43Q68DV7 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RNF43Q68DV7 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF43Q68DV7 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF43Q68DV7 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
RNF43Q68DV7 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF43Q68DV7 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.43■□□□□ 0.54
RNF43Q68DV7 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RNF43Q68DV7 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RNF43Q68DV7 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.43■□□□□ 0.54
RNF43Q68DV7 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF43Q68DV7 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF43Q68DV7 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF43Q68DV7 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF43Q68DV7 AKR1C7P-201ENST00000305623 895 ntBASIC18.43■□□□□ 0.54
RNF43Q68DV7 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC18.43■□□□□ 0.54
RNF43Q68DV7 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.43■□□□□ 0.54
RNF43Q68DV7 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
RNF43Q68DV7 AP001005.1-201ENST00000571755 1248 ntBASIC18.43■□□□□ 0.54
RNF43Q68DV7 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.43■□□□□ 0.54
RNF43Q68DV7 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF43Q68DV7 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.43■□□□□ 0.54
RNF43Q68DV7 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC18.43■□□□□ 0.54
RNF43Q68DV7 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.43■□□□□ 0.54
RNF43Q68DV7 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RNF43Q68DV7 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RNF43Q68DV7 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RNF43Q68DV7 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.43■□□□□ 0.54
RNF43Q68DV7 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
RNF43Q68DV7 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF43Q68DV7 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF43Q68DV7 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF43Q68DV7 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
RNF43Q68DV7 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF43Q68DV7 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
RNF43Q68DV7 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.43■□□□□ 0.54
RNF43Q68DV7 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
RNF43Q68DV7 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.42■□□□□ 0.54
RNF43Q68DV7 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RNF43Q68DV7 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
RNF43Q68DV7 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.42■□□□□ 0.54
RNF43Q68DV7 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RNF43Q68DV7 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RNF43Q68DV7 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF43Q68DV7 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RNF43Q68DV7 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF43Q68DV7 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF43Q68DV7 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
RNF43Q68DV7 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF43Q68DV7 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms