Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
RNF20Q5VTR2 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RNF20Q5VTR2 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC21.01■□□□□ 0.95
RNF20Q5VTR2 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF20Q5VTR2 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF20Q5VTR2 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC21■□□□□ 0.95
RNF20Q5VTR2 AC108860.2-201ENST00000562760 2183 ntBASIC21■□□□□ 0.95
RNF20Q5VTR2 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC21■□□□□ 0.95
RNF20Q5VTR2 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
RNF20Q5VTR2 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RNF20Q5VTR2 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC21■□□□□ 0.95
RNF20Q5VTR2 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC21■□□□□ 0.95
RNF20Q5VTR2 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
RNF20Q5VTR2 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC21■□□□□ 0.95
RNF20Q5VTR2 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
RNF20Q5VTR2 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RNF20Q5VTR2 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC21■□□□□ 0.95
RNF20Q5VTR2 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
RNF20Q5VTR2 FAM220CP-201ENST00000395253 831 ntBASIC21■□□□□ 0.95
RNF20Q5VTR2 IGHV3-52-201ENST00000519770 353 ntBASIC21■□□□□ 0.95
RNF20Q5VTR2 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC21■□□□□ 0.95
RNF20Q5VTR2 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC21■□□□□ 0.95
RNF20Q5VTR2 AC009533.2-201ENST00000543664 586 ntBASIC21■□□□□ 0.95
RNF20Q5VTR2 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
RNF20Q5VTR2 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC21■□□□□ 0.95
RNF20Q5VTR2 AL139327.4-201ENST00000612362 153 ntBASIC21■□□□□ 0.95
RNF20Q5VTR2 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC21■□□□□ 0.95
RNF20Q5VTR2 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
RNF20Q5VTR2 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC21■□□□□ 0.95
RNF20Q5VTR2 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC21■□□□□ 0.95
RNF20Q5VTR2 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC21■□□□□ 0.95
RNF20Q5VTR2 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
RNF20Q5VTR2 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
RNF20Q5VTR2 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RNF20Q5VTR2 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF20Q5VTR2 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF20Q5VTR2 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC20.99■□□□□ 0.95
RNF20Q5VTR2 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RNF20Q5VTR2 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
RNF20Q5VTR2 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
RNF20Q5VTR2 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF20Q5VTR2 AC016396.2-201ENST00000562575 1417 ntBASIC20.99■□□□□ 0.95
RNF20Q5VTR2 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF20Q5VTR2 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF20Q5VTR2 AC103564.2-201ENST00000432853 1299 ntBASIC20.99■□□□□ 0.95
RNF20Q5VTR2 DRAXINP1-201ENST00000437611 948 ntBASIC20.99■□□□□ 0.95
RNF20Q5VTR2 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RNF20Q5VTR2 MEG3-211ENST00000452514 461 ntTSL 3 BASIC20.99■□□□□ 0.95
RNF20Q5VTR2 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC20.99■□□□□ 0.95
RNF20Q5VTR2 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC20.99■□□□□ 0.95
RNF20Q5VTR2 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
RNF20Q5VTR2 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
RNF20Q5VTR2 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC20.99■□□□□ 0.95
RNF20Q5VTR2 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC20.99■□□□□ 0.95
RNF20Q5VTR2 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF20Q5VTR2 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RNF20Q5VTR2 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC20.99■□□□□ 0.95
RNF20Q5VTR2 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF20Q5VTR2 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF20Q5VTR2 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RNF20Q5VTR2 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
RNF20Q5VTR2 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC20.99■□□□□ 0.95
RNF20Q5VTR2 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC20.99■□□□□ 0.95
RNF20Q5VTR2 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
RNF20Q5VTR2 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF20Q5VTR2 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF20Q5VTR2 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF20Q5VTR2 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
RNF20Q5VTR2 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC20.98■□□□□ 0.95
RNF20Q5VTR2 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC20.98■□□□□ 0.95
RNF20Q5VTR2 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF20Q5VTR2 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF20Q5VTR2 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF20Q5VTR2 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
RNF20Q5VTR2 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF20Q5VTR2 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RNF20Q5VTR2 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF20Q5VTR2 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RNF20Q5VTR2 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC20.98■□□□□ 0.95
RNF20Q5VTR2 KRT18P35-201ENST00000510488 1269 ntBASIC20.98■□□□□ 0.95
RNF20Q5VTR2 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC20.98■□□□□ 0.95
RNF20Q5VTR2 Z69720.1-201ENST00000601483 472 ntBASIC20.98■□□□□ 0.95
RNF20Q5VTR2 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF20Q5VTR2 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RNF20Q5VTR2 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RNF20Q5VTR2 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF20Q5VTR2 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF20Q5VTR2 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RNF20Q5VTR2 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF20Q5VTR2 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF20Q5VTR2 BANP-227ENST00000626016 2144 ntTSL 2 BASIC20.98■□□□□ 0.95
RNF20Q5VTR2 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF20Q5VTR2 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC20.97■□□□□ 0.95
RNF20Q5VTR2 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RNF20Q5VTR2 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC20.97■□□□□ 0.95
RNF20Q5VTR2 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF20Q5VTR2 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC20.97■□□□□ 0.95
RNF20Q5VTR2 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF20Q5VTR2 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC20.97■□□□□ 0.95
RNF20Q5VTR2 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms