Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 SNORA78-201ENST00000459373 127 ntBASIC16.99■□□□□ 0.31
RNF220Q5VTB9 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC16.99■□□□□ 0.31
RNF220Q5VTB9 C2orf69P3-201ENST00000565542 1120 ntBASIC16.99■□□□□ 0.31
RNF220Q5VTB9 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC16.99■□□□□ 0.31
RNF220Q5VTB9 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNF220Q5VTB9 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.99■□□□□ 0.31
RNF220Q5VTB9 AC116562.4-202ENST00000641738 218 ntBASIC16.99■□□□□ 0.31
RNF220Q5VTB9 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNF220Q5VTB9 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
RNF220Q5VTB9 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RNF220Q5VTB9 AL603756.1-201ENST00000606511 2163 ntBASIC16.99■□□□□ 0.31
RNF220Q5VTB9 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
RNF220Q5VTB9 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNF220Q5VTB9 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.99■□□□□ 0.31
RNF220Q5VTB9 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
RNF220Q5VTB9 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
RNF220Q5VTB9 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNF220Q5VTB9 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNF220Q5VTB9 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RNF220Q5VTB9 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RNF220Q5VTB9 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
RNF220Q5VTB9 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
RNF220Q5VTB9 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
RNF220Q5VTB9 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
RNF220Q5VTB9 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
RNF220Q5VTB9 AL662844.4-201ENST00000606367 2838 ntBASIC16.98■□□□□ 0.31
RNF220Q5VTB9 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RNF220Q5VTB9 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RNF220Q5VTB9 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RNF220Q5VTB9 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
RNF220Q5VTB9 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
RNF220Q5VTB9 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.98■□□□□ 0.31
RNF220Q5VTB9 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RNF220Q5VTB9 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.98■□□□□ 0.31
RNF220Q5VTB9 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
RNF220Q5VTB9 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC16.98■□□□□ 0.31
RNF220Q5VTB9 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RNF220Q5VTB9 BX088651.1-201ENST00000540551 451 ntBASIC16.98■□□□□ 0.31
RNF220Q5VTB9 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RNF220Q5VTB9 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RNF220Q5VTB9 CR769767.2-201ENST00000622735 460 ntBASIC16.98■□□□□ 0.31
RNF220Q5VTB9 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC16.98■□□□□ 0.31
RNF220Q5VTB9 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RNF220Q5VTB9 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RNF220Q5VTB9 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.98■□□□□ 0.31
RNF220Q5VTB9 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RNF220Q5VTB9 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
RNF220Q5VTB9 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.98■□□□□ 0.31
RNF220Q5VTB9 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RNF220Q5VTB9 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RNF220Q5VTB9 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RNF220Q5VTB9 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RNF220Q5VTB9 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RNF220Q5VTB9 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
RNF220Q5VTB9 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RNF220Q5VTB9 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF220Q5VTB9 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF220Q5VTB9 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.97■□□□□ 0.31
RNF220Q5VTB9 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
RNF220Q5VTB9 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.97■□□□□ 0.31
RNF220Q5VTB9 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
RNF220Q5VTB9 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC16.97■□□□□ 0.31
RNF220Q5VTB9 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
RNF220Q5VTB9 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
RNF220Q5VTB9 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
RNF220Q5VTB9 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF220Q5VTB9 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF220Q5VTB9 MIR1238-201ENST00000408483 83 ntBASIC16.97■□□□□ 0.31
RNF220Q5VTB9 AL390955.1-201ENST00000428694 934 ntBASIC16.97■□□□□ 0.31
RNF220Q5VTB9 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.97■□□□□ 0.31
RNF220Q5VTB9 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.97■□□□□ 0.31
RNF220Q5VTB9 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC16.97■□□□□ 0.31
RNF220Q5VTB9 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.97■□□□□ 0.31
RNF220Q5VTB9 AL355075.4-201ENST00000554988 638 ntBASIC16.97■□□□□ 0.31
RNF220Q5VTB9 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.97■□□□□ 0.31
RNF220Q5VTB9 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC16.97■□□□□ 0.31
RNF220Q5VTB9 AC010653.2-201ENST00000623505 997 ntBASIC16.97■□□□□ 0.31
RNF220Q5VTB9 GLDC-219ENST00000640208 420 ntTSL 2 BASIC16.97■□□□□ 0.31
RNF220Q5VTB9 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF220Q5VTB9 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
RNF220Q5VTB9 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
RNF220Q5VTB9 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.97■□□□□ 0.31
RNF220Q5VTB9 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF220Q5VTB9 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF220Q5VTB9 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF220Q5VTB9 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.97■□□□□ 0.31
RNF220Q5VTB9 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF220Q5VTB9 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RNF220Q5VTB9 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
RNF220Q5VTB9 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RNF220Q5VTB9 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF220Q5VTB9 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF220Q5VTB9 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF220Q5VTB9 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF220Q5VTB9 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF220Q5VTB9 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.96■□□□□ 0.31
RNF220Q5VTB9 FER1L4-210ENST00000615531 5998 ntBASIC16.96■□□□□ 0.31
RNF220Q5VTB9 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.96■□□□□ 0.31
RNF220Q5VTB9 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC16.96■□□□□ 0.31
RNF220Q5VTB9 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms