Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.24■□□□□ 0.51
LRRC38Q5VT99 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRRC38Q5VT99 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.24■□□□□ 0.51
LRRC38Q5VT99 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LRRC38Q5VT99 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LRRC38Q5VT99 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.24■□□□□ 0.51
LRRC38Q5VT99 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.24■□□□□ 0.51
LRRC38Q5VT99 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.24■□□□□ 0.51
LRRC38Q5VT99 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.24■□□□□ 0.51
LRRC38Q5VT99 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRRC38Q5VT99 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRRC38Q5VT99 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
LRRC38Q5VT99 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRRC38Q5VT99 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRRC38Q5VT99 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LRRC38Q5VT99 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
LRRC38Q5VT99 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.24■□□□□ 0.51
LRRC38Q5VT99 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRRC38Q5VT99 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LRRC38Q5VT99 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC38Q5VT99 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
LRRC38Q5VT99 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC38Q5VT99 LINC02012-201ENST00000608206 1725 ntBASIC18.23■□□□□ 0.51
LRRC38Q5VT99 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC18.23■□□□□ 0.51
LRRC38Q5VT99 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC38Q5VT99 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC38Q5VT99 AC138932.1-201ENST00000534164 6830 ntBASIC18.23■□□□□ 0.51
LRRC38Q5VT99 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
LRRC38Q5VT99 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC38Q5VT99 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
LRRC38Q5VT99 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.23■□□□□ 0.51
LRRC38Q5VT99 AC009533.2-201ENST00000543664 586 ntBASIC18.23■□□□□ 0.51
LRRC38Q5VT99 AC111152.3-201ENST00000569699 673 ntBASIC18.23■□□□□ 0.51
LRRC38Q5VT99 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC38Q5VT99 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC38Q5VT99 AL121672.3-201ENST00000608644 468 ntBASIC18.23■□□□□ 0.51
LRRC38Q5VT99 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
LRRC38Q5VT99 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC38Q5VT99 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC38Q5VT99 AC046185.3-201ENST00000623228 1824 ntBASIC18.23■□□□□ 0.51
LRRC38Q5VT99 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC38Q5VT99 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC18.23■□□□□ 0.51
LRRC38Q5VT99 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC38Q5VT99 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.23■□□□□ 0.51
LRRC38Q5VT99 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC38Q5VT99 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.22■□□□□ 0.51
LRRC38Q5VT99 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC38Q5VT99 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC38Q5VT99 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC38Q5VT99 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC38Q5VT99 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC18.22■□□□□ 0.51
LRRC38Q5VT99 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
LRRC38Q5VT99 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC38Q5VT99 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC38Q5VT99 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC38Q5VT99 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC38Q5VT99 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC38Q5VT99 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.22■□□□□ 0.51
LRRC38Q5VT99 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC38Q5VT99 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC38Q5VT99 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.22■□□□□ 0.51
LRRC38Q5VT99 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC38Q5VT99 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.22■□□□□ 0.51
LRRC38Q5VT99 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.22■□□□□ 0.51
LRRC38Q5VT99 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.22■□□□□ 0.51
LRRC38Q5VT99 CHCHD2P8-201ENST00000429873 447 ntBASIC18.22■□□□□ 0.51
LRRC38Q5VT99 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18.22■□□□□ 0.51
LRRC38Q5VT99 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC38Q5VT99 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.22■□□□□ 0.51
LRRC38Q5VT99 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.22■□□□□ 0.51
LRRC38Q5VT99 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC38Q5VT99 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.22■□□□□ 0.51
LRRC38Q5VT99 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC38Q5VT99 STK25P1-201ENST00000585406 838 ntBASIC18.22■□□□□ 0.51
LRRC38Q5VT99 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.22■□□□□ 0.51
LRRC38Q5VT99 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC38Q5VT99 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC38Q5VT99 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC38Q5VT99 AC093525.9-201ENST00000624961 1746 ntBASIC18.22■□□□□ 0.51
LRRC38Q5VT99 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
LRRC38Q5VT99 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
LRRC38Q5VT99 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC38Q5VT99 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
LRRC38Q5VT99 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC38Q5VT99 AC005332.1-201ENST00000577698 1310 ntBASIC18.22■□□□□ 0.51
LRRC38Q5VT99 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC38Q5VT99 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC38Q5VT99 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.22■□□□□ 0.51
LRRC38Q5VT99 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.21■□□□□ 0.51
LRRC38Q5VT99 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.21■□□□□ 0.51
LRRC38Q5VT99 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRRC38Q5VT99 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC18.21■□□□□ 0.51
LRRC38Q5VT99 AL353593.2-201ENST00000602529 1483 ntBASIC18.21■□□□□ 0.51
LRRC38Q5VT99 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRRC38Q5VT99 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRRC38Q5VT99 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.21■□□□□ 0.51
LRRC38Q5VT99 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LRRC38Q5VT99 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRRC38Q5VT99 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRRC38Q5VT99 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms