Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC20.98■□□□□ 0.95
PDS5AQ29RF7 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC20.98■□□□□ 0.95
PDS5AQ29RF7 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
PDS5AQ29RF7 AC092865.5-201ENST00000545435 363 ntBASIC20.98■□□□□ 0.95
PDS5AQ29RF7 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC20.98■□□□□ 0.95
PDS5AQ29RF7 AC002347.1-201ENST00000569543 541 ntBASIC20.98■□□□□ 0.95
PDS5AQ29RF7 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC20.98■□□□□ 0.95
PDS5AQ29RF7 AC004790.2-201ENST00000623588 572 ntBASIC20.98■□□□□ 0.95
PDS5AQ29RF7 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PDS5AQ29RF7 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PDS5AQ29RF7 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC20.97■□□□□ 0.95
PDS5AQ29RF7 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PDS5AQ29RF7 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC20.97■□□□□ 0.95
PDS5AQ29RF7 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PDS5AQ29RF7 NME9-203ENST00000383180 2133 ntTSL 2 BASIC20.97■□□□□ 0.95
PDS5AQ29RF7 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PDS5AQ29RF7 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PDS5AQ29RF7 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PDS5AQ29RF7 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PDS5AQ29RF7 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC20.97■□□□□ 0.95
PDS5AQ29RF7 YBX2P1-201ENST00000394192 760 ntBASIC20.97■□□□□ 0.95
PDS5AQ29RF7 IGLL3P-201ENST00000412472 434 ntBASIC20.97■□□□□ 0.95
PDS5AQ29RF7 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC20.97■□□□□ 0.95
PDS5AQ29RF7 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PDS5AQ29RF7 KRT18P2-201ENST00000447938 1258 ntBASIC20.97■□□□□ 0.95
PDS5AQ29RF7 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC20.97■□□□□ 0.95
PDS5AQ29RF7 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC20.97■□□□□ 0.95
PDS5AQ29RF7 OR7E47P-204ENST00000575924 449 ntBASIC20.97■□□□□ 0.95
PDS5AQ29RF7 MIR4751-201ENST00000578027 74 ntBASIC20.97■□□□□ 0.95
PDS5AQ29RF7 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PDS5AQ29RF7 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC20.97■□□□□ 0.95
PDS5AQ29RF7 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC20.97■□□□□ 0.95
PDS5AQ29RF7 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PDS5AQ29RF7 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PDS5AQ29RF7 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
PDS5AQ29RF7 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC20.97■□□□□ 0.95
PDS5AQ29RF7 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PDS5AQ29RF7 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC20.96■□□□□ 0.95
PDS5AQ29RF7 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PDS5AQ29RF7 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC20.96■□□□□ 0.95
PDS5AQ29RF7 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
PDS5AQ29RF7 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC20.96■□□□□ 0.95
PDS5AQ29RF7 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PDS5AQ29RF7 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
PDS5AQ29RF7 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC20.96■□□□□ 0.95
PDS5AQ29RF7 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
PDS5AQ29RF7 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC20.96■□□□□ 0.95
PDS5AQ29RF7 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.96■□□□□ 0.95
PDS5AQ29RF7 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PDS5AQ29RF7 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PDS5AQ29RF7 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
PDS5AQ29RF7 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC20.96■□□□□ 0.95
PDS5AQ29RF7 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
PDS5AQ29RF7 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC20.96■□□□□ 0.95
PDS5AQ29RF7 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
PDS5AQ29RF7 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PDS5AQ29RF7 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC20.96■□□□□ 0.95
PDS5AQ29RF7 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC20.96■□□□□ 0.95
PDS5AQ29RF7 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PDS5AQ29RF7 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC20.96■□□□□ 0.95
PDS5AQ29RF7 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
PDS5AQ29RF7 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PDS5AQ29RF7 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC20.96■□□□□ 0.95
PDS5AQ29RF7 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PDS5AQ29RF7 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC20.96■□□□□ 0.95
PDS5AQ29RF7 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PDS5AQ29RF7 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC20.95■□□□□ 0.95
PDS5AQ29RF7 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PDS5AQ29RF7 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC20.95■□□□□ 0.94
PDS5AQ29RF7 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PDS5AQ29RF7 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PDS5AQ29RF7 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
PDS5AQ29RF7 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
PDS5AQ29RF7 AC002310.6-201ENST00000624451 1377 ntBASIC20.95■□□□□ 0.94
PDS5AQ29RF7 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PDS5AQ29RF7 PODN-203ENST00000395871 2744 ntTSL 5 BASIC20.95■□□□□ 0.94
PDS5AQ29RF7 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC20.95■□□□□ 0.94
PDS5AQ29RF7 GPX1P2-201ENST00000429271 606 ntBASIC20.95■□□□□ 0.94
PDS5AQ29RF7 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC20.95■□□□□ 0.94
PDS5AQ29RF7 DNAJB3-201ENST00000446806 729 ntBASIC20.95■□□□□ 0.94
PDS5AQ29RF7 PAWRP1-201ENST00000451083 565 ntBASIC20.95■□□□□ 0.94
PDS5AQ29RF7 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC20.95■□□□□ 0.94
PDS5AQ29RF7 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC20.95■□□□□ 0.94
PDS5AQ29RF7 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PDS5AQ29RF7 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC20.95■□□□□ 0.94
PDS5AQ29RF7 COX5A-206ENST00000568783 571 ntTSL 3 BASIC20.95■□□□□ 0.94
PDS5AQ29RF7 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PDS5AQ29RF7 LYSMD4-203ENST00000378904 2122 ntBASIC20.95■□□□□ 0.94
PDS5AQ29RF7 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PDS5AQ29RF7 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PDS5AQ29RF7 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
PDS5AQ29RF7 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PDS5AQ29RF7 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
PDS5AQ29RF7 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PDS5AQ29RF7 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PDS5AQ29RF7 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC20.94■□□□□ 0.94
PDS5AQ29RF7 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PDS5AQ29RF7 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
PDS5AQ29RF7 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC20.94■□□□□ 0.94
PDS5AQ29RF7 UPF3AP3-201ENST00000420996 769 ntBASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms