Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
GABREP78334 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
GABREP78334 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GABREP78334 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.66■□□□□ 0.26
GABREP78334 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC16.66■□□□□ 0.26
GABREP78334 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
GABREP78334 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.66■□□□□ 0.26
GABREP78334 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
GABREP78334 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
GABREP78334 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GABREP78334 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
GABREP78334 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GABREP78334 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
GABREP78334 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
GABREP78334 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.66■□□□□ 0.26
GABREP78334 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.66■□□□□ 0.26
GABREP78334 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
GABREP78334 AP000344.2-201ENST00000512987 629 ntBASIC16.66■□□□□ 0.26
GABREP78334 KRT19P2-202ENST00000557173 1012 ntBASIC16.66■□□□□ 0.26
GABREP78334 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
GABREP78334 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
GABREP78334 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
GABREP78334 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
GABREP78334 AL049757.1-201ENST00000616842 1596 ntBASIC16.66■□□□□ 0.26
GABREP78334 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.66■□□□□ 0.26
GABREP78334 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GABREP78334 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
GABREP78334 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
GABREP78334 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GABREP78334 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
GABREP78334 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
GABREP78334 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.66■□□□□ 0.26
GABREP78334 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GABREP78334 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GABREP78334 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GABREP78334 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
GABREP78334 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
GABREP78334 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GABREP78334 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GABREP78334 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GABREP78334 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GABREP78334 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GABREP78334 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GABREP78334 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GABREP78334 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GABREP78334 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GABREP78334 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.65■□□□□ 0.26
GABREP78334 AL035633.1-201ENST00000406139 838 ntBASIC16.65■□□□□ 0.26
GABREP78334 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GABREP78334 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.65■□□□□ 0.26
GABREP78334 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
GABREP78334 AC096734.2-201ENST00000562054 433 ntBASIC16.65■□□□□ 0.26
GABREP78334 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GABREP78334 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.65■□□□□ 0.26
GABREP78334 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
GABREP78334 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC16.65■□□□□ 0.26
GABREP78334 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GABREP78334 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GABREP78334 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GABREP78334 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.65■□□□□ 0.26
GABREP78334 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GABREP78334 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC16.65■□□□□ 0.26
GABREP78334 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
GABREP78334 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GABREP78334 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GABREP78334 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
GABREP78334 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
GABREP78334 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.65■□□□□ 0.26
GABREP78334 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
GABREP78334 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
GABREP78334 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
GABREP78334 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC16.64■□□□□ 0.25
GABREP78334 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
GABREP78334 AC093010.1-201ENST00000473625 1624 ntBASIC16.64■□□□□ 0.25
GABREP78334 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GABREP78334 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GABREP78334 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GABREP78334 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.64■□□□□ 0.25
GABREP78334 ACTG1P14-201ENST00000446382 1122 ntBASIC16.64■□□□□ 0.25
GABREP78334 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.64■□□□□ 0.25
GABREP78334 LHX6-205ENST00000464484 666 ntTSL 2 BASIC16.64■□□□□ 0.25
GABREP78334 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
GABREP78334 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.64■□□□□ 0.25
GABREP78334 SPCS2P1-201ENST00000561636 679 ntBASIC16.64■□□□□ 0.25
GABREP78334 AC004449.1-201ENST00000564240 433 ntBASIC16.64■□□□□ 0.25
GABREP78334 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.64■□□□□ 0.25
GABREP78334 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.64■□□□□ 0.25
GABREP78334 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC16.64■□□□□ 0.25
GABREP78334 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.64■□□□□ 0.25
GABREP78334 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GABREP78334 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GABREP78334 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GABREP78334 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GABREP78334 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
GABREP78334 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GABREP78334 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC16.64■□□□□ 0.25
GABREP78334 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
GABREP78334 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
GABREP78334 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GABREP78334 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms