Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
AP3S2P59780 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
AP3S2P59780 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
AP3S2P59780 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.14■□□□□ 0.01
AP3S2P59780 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
AP3S2P59780 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
AP3S2P59780 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
AP3S2P59780 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
AP3S2P59780 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.13■□□□□ 0.01
AP3S2P59780 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
AP3S2P59780 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.13■□□□□ 0.01
AP3S2P59780 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
AP3S2P59780 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
AP3S2P59780 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
AP3S2P59780 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
AP3S2P59780 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
AP3S2P59780 METTL15-202ENST00000403099 795 ntTSL 5 BASIC15.13■□□□□ 0.01
AP3S2P59780 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
AP3S2P59780 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
AP3S2P59780 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
AP3S2P59780 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC15.13■□□□□ 0.01
AP3S2P59780 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
AP3S2P59780 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC15.13■□□□□ 0.01
AP3S2P59780 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
AP3S2P59780 HOXB1-202ENST00000577092 1414 ntBASIC15.13■□□□□ 0.01
AP3S2P59780 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC15.13■□□□□ 0.01
AP3S2P59780 NAT14-202ENST00000587400 416 ntTSL 5 BASIC15.13■□□□□ 0.01
AP3S2P59780 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC15.13■□□□□ 0.01
AP3S2P59780 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
AP3S2P59780 AC087623.3-201ENST00000607047 1098 ntBASIC15.13■□□□□ 0.01
AP3S2P59780 AC011298.2-201ENST00000617989 482 ntBASIC15.13■□□□□ 0.01
AP3S2P59780 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
AP3S2P59780 AC006449.5-201ENST00000610658 2098 ntBASIC15.13■□□□□ 0.01
AP3S2P59780 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
AP3S2P59780 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
AP3S2P59780 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
AP3S2P59780 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
AP3S2P59780 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
AP3S2P59780 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
AP3S2P59780 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
AP3S2P59780 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
AP3S2P59780 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
AP3S2P59780 MIR600HG-201ENST00000449175 5984 ntBASIC15.13■□□□□ 0.01
AP3S2P59780 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
AP3S2P59780 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
AP3S2P59780 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
AP3S2P59780 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC15.12■□□□□ 0.01
AP3S2P59780 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC15.12■□□□□ 0.01
AP3S2P59780 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
AP3S2P59780 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
AP3S2P59780 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
AP3S2P59780 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
AP3S2P59780 RHBDF1P1-201ENST00000427504 1941 ntBASIC15.12■□□□□ 0.01
AP3S2P59780 REXO1L11P-201ENST00000620964 1927 ntBASIC15.12■□□□□ 0.01
AP3S2P59780 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
AP3S2P59780 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
AP3S2P59780 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.12■□□□□ 0.01
AP3S2P59780 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
AP3S2P59780 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
AP3S2P59780 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
AP3S2P59780 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
AP3S2P59780 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.12■□□□□ 0.01
AP3S2P59780 PPP1R14BP2-201ENST00000426284 444 ntBASIC15.12■□□□□ 0.01
AP3S2P59780 DDX43P3-201ENST00000441064 443 ntBASIC15.12■□□□□ 0.01
AP3S2P59780 FAM207BP-201ENST00000447172 505 ntBASIC15.12■□□□□ 0.01
AP3S2P59780 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC15.12■□□□□ 0.01
AP3S2P59780 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC15.12■□□□□ 0.01
AP3S2P59780 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC15.12■□□□□ 0.01
AP3S2P59780 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC15.12■□□□□ 0.01
AP3S2P59780 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC15.12■□□□□ 0.01
AP3S2P59780 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC15.12■□□□□ 0.01
AP3S2P59780 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC15.12■□□□□ 0.01
AP3S2P59780 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
AP3S2P59780 TK2-221ENST00000620035 5060 ntTSL 2 BASIC15.12■□□□□ 0.01
AP3S2P59780 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
AP3S2P59780 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
AP3S2P59780 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
AP3S2P59780 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
AP3S2P59780 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
AP3S2P59780 AC132938.6-201ENST00000623828 1655 ntBASIC15.12■□□□□ 0.01
AP3S2P59780 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
AP3S2P59780 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
AP3S2P59780 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC15.12■□□□□ 0.01
AP3S2P59780 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
AP3S2P59780 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.12■□□□□ 0.01
AP3S2P59780 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
AP3S2P59780 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC15.12■□□□□ 0.01
AP3S2P59780 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
AP3S2P59780 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
AP3S2P59780 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.11■□□□□ 0.01
AP3S2P59780 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
AP3S2P59780 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
AP3S2P59780 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.11■□□□□ 0.01
AP3S2P59780 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
AP3S2P59780 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
AP3S2P59780 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
AP3S2P59780 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.11■□□□□ 0.01
AP3S2P59780 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.11■□□□□ 0.01
AP3S2P59780 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
AP3S2P59780 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms