Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VSX2P58304 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.85■□□□□ 0.29
VSX2P58304 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.85■□□□□ 0.29
VSX2P58304 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.85■□□□□ 0.29
VSX2P58304 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.85■□□□□ 0.29
VSX2P58304 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.85■□□□□ 0.29
VSX2P58304 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VSX2P58304 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
VSX2P58304 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.85■□□□□ 0.29
VSX2P58304 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
VSX2P58304 AC106820.2-201ENST00000563775 3264 ntBASIC16.85■□□□□ 0.29
VSX2P58304 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.85■□□□□ 0.29
VSX2P58304 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
VSX2P58304 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VSX2P58304 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
VSX2P58304 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VSX2P58304 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
VSX2P58304 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VSX2P58304 AC012317.2-201ENST00000623305 2251 ntBASIC16.85■□□□□ 0.29
VSX2P58304 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.85■□□□□ 0.29
VSX2P58304 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
VSX2P58304 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.84■□□□□ 0.29
VSX2P58304 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
VSX2P58304 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VSX2P58304 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VSX2P58304 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VSX2P58304 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VSX2P58304 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
VSX2P58304 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VSX2P58304 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VSX2P58304 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
VSX2P58304 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VSX2P58304 RBM17P3-201ENST00000417687 1192 ntBASIC16.84■□□□□ 0.29
VSX2P58304 AC026396.1-201ENST00000419388 421 ntBASIC16.84■□□□□ 0.29
VSX2P58304 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.84■□□□□ 0.29
VSX2P58304 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.84■□□□□ 0.29
VSX2P58304 AC106795.1-205ENST00000512851 1056 ntBASIC16.84■□□□□ 0.29
VSX2P58304 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VSX2P58304 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VSX2P58304 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VSX2P58304 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
VSX2P58304 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.84■□□□□ 0.29
VSX2P58304 AP005117.1-201ENST00000584346 1413 ntBASIC16.84■□□□□ 0.29
VSX2P58304 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VSX2P58304 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.84■□□□□ 0.29
VSX2P58304 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VSX2P58304 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
VSX2P58304 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.84■□□□□ 0.29
VSX2P58304 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
VSX2P58304 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
VSX2P58304 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
VSX2P58304 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.83■□□□□ 0.29
VSX2P58304 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
VSX2P58304 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.83■□□□□ 0.28
VSX2P58304 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VSX2P58304 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VSX2P58304 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
VSX2P58304 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.83■□□□□ 0.28
VSX2P58304 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VSX2P58304 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
VSX2P58304 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
VSX2P58304 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VSX2P58304 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.83■□□□□ 0.28
VSX2P58304 NOC2LP1-202ENST00000452600 2235 ntBASIC16.83■□□□□ 0.28
VSX2P58304 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.83■□□□□ 0.28
VSX2P58304 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.83■□□□□ 0.28
VSX2P58304 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
VSX2P58304 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
VSX2P58304 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.83■□□□□ 0.28
VSX2P58304 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.83■□□□□ 0.28
VSX2P58304 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.83■□□□□ 0.28
VSX2P58304 KLK8-205ENST00000593490 267 ntTSL 3 BASIC16.83■□□□□ 0.28
VSX2P58304 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
VSX2P58304 AL355877.3-201ENST00000622820 899 ntBASIC16.83■□□□□ 0.28
VSX2P58304 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
VSX2P58304 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.83■□□□□ 0.28
VSX2P58304 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
VSX2P58304 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.83■□□□□ 0.28
VSX2P58304 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
VSX2P58304 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
VSX2P58304 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VSX2P58304 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
VSX2P58304 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VSX2P58304 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
VSX2P58304 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.82■□□□□ 0.28
VSX2P58304 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
VSX2P58304 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.82■□□□□ 0.28
VSX2P58304 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VSX2P58304 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.82■□□□□ 0.28
VSX2P58304 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.82■□□□□ 0.28
VSX2P58304 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VSX2P58304 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VSX2P58304 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
VSX2P58304 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VSX2P58304 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.82■□□□□ 0.28
VSX2P58304 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
VSX2P58304 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VSX2P58304 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VSX2P58304 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
VSX2P58304 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms