Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN6P56747 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN6P56747 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN6P56747 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CLDN6P56747 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
CLDN6P56747 KLF4P1-201ENST00000412782 1185 ntBASIC16.83■□□□□ 0.28
CLDN6P56747 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN6P56747 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN6P56747 AC103564.2-201ENST00000432853 1299 ntBASIC16.83■□□□□ 0.28
CLDN6P56747 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC16.83■□□□□ 0.28
CLDN6P56747 PRSS29P-201ENST00000440800 595 ntBASIC16.83■□□□□ 0.28
CLDN6P56747 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.83■□□□□ 0.28
CLDN6P56747 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN6P56747 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.83■□□□□ 0.28
CLDN6P56747 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.83■□□□□ 0.28
CLDN6P56747 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN6P56747 OR7E47P-204ENST00000575924 449 ntBASIC16.83■□□□□ 0.28
CLDN6P56747 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.83■□□□□ 0.28
CLDN6P56747 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.83■□□□□ 0.28
CLDN6P56747 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN6P56747 AC025580.3-201ENST00000617932 1424 ntBASIC16.83■□□□□ 0.28
CLDN6P56747 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.83■□□□□ 0.28
CLDN6P56747 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN6P56747 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN6P56747 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN6P56747 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN6P56747 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN6P56747 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN6P56747 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN6P56747 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN6P56747 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN6P56747 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN6P56747 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.82■□□□□ 0.28
CLDN6P56747 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CLDN6P56747 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.82■□□□□ 0.28
CLDN6P56747 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.82■□□□□ 0.28
CLDN6P56747 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN6P56747 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN6P56747 PTCHD3P3-201ENST00000403073 906 ntBASIC16.82■□□□□ 0.28
CLDN6P56747 BCRP1-201ENST00000444246 691 ntBASIC16.82■□□□□ 0.28
CLDN6P56747 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.82■□□□□ 0.28
CLDN6P56747 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN6P56747 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.82■□□□□ 0.28
CLDN6P56747 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CLDN6P56747 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.82■□□□□ 0.28
CLDN6P56747 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.82■□□□□ 0.28
CLDN6P56747 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.82■□□□□ 0.28
CLDN6P56747 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.82■□□□□ 0.28
CLDN6P56747 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.82■□□□□ 0.28
CLDN6P56747 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN6P56747 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN6P56747 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.82■□□□□ 0.28
CLDN6P56747 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN6P56747 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN6P56747 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.82■□□□□ 0.28
CLDN6P56747 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN6P56747 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.82■□□□□ 0.28
CLDN6P56747 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN6P56747 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN6P56747 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CLDN6P56747 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN6P56747 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CLDN6P56747 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
CLDN6P56747 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
CLDN6P56747 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN6P56747 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN6P56747 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN6P56747 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CLDN6P56747 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN6P56747 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN6P56747 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN6P56747 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN6P56747 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.81■□□□□ 0.28
CLDN6P56747 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.81■□□□□ 0.28
CLDN6P56747 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.81■□□□□ 0.28
CLDN6P56747 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.81■□□□□ 0.28
CLDN6P56747 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.81■□□□□ 0.28
CLDN6P56747 AC004449.1-201ENST00000564240 433 ntBASIC16.81■□□□□ 0.28
CLDN6P56747 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.81■□□□□ 0.28
CLDN6P56747 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.81■□□□□ 0.28
CLDN6P56747 AC091812.2-201ENST00000619081 385 ntBASIC16.81■□□□□ 0.28
CLDN6P56747 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
CLDN6P56747 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
CLDN6P56747 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC16.81■□□□□ 0.28
CLDN6P56747 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN6P56747 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC16.81■□□□□ 0.28
CLDN6P56747 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN6P56747 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN6P56747 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN6P56747 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN6P56747 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN6P56747 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CLDN6P56747 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN6P56747 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN6P56747 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CLDN6P56747 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC16.8■□□□□ 0.28
CLDN6P56747 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CLDN6P56747 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.8■□□□□ 0.28
CLDN6P56747 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN6P56747 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms