Protein–RNA interactions for Protein: P56703

WNT3, Proto-oncogene Wnt-3, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3P56703 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
WNT3P56703 AL645929.1-201ENST00000420084 975 ntBASIC16.63■□□□□ 0.25
WNT3P56703 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.63■□□□□ 0.25
WNT3P56703 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.63■□□□□ 0.25
WNT3P56703 AC002558.1-201ENST00000488906 803 ntBASIC16.63■□□□□ 0.25
WNT3P56703 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.63■□□□□ 0.25
WNT3P56703 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
WNT3P56703 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
WNT3P56703 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
WNT3P56703 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.63■□□□□ 0.25
WNT3P56703 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
WNT3P56703 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
WNT3P56703 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.63■□□□□ 0.25
WNT3P56703 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
WNT3P56703 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
WNT3P56703 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.63■□□□□ 0.25
WNT3P56703 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
WNT3P56703 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
WNT3P56703 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
WNT3P56703 AC060834.1-201ENST00000443027 2032 ntBASIC16.62■□□□□ 0.25
WNT3P56703 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.62■□□□□ 0.25
WNT3P56703 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
WNT3P56703 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.62■□□□□ 0.25
WNT3P56703 AC138932.1-201ENST00000534164 6830 ntBASIC16.62■□□□□ 0.25
WNT3P56703 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
WNT3P56703 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.62■□□□□ 0.25
WNT3P56703 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
WNT3P56703 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
WNT3P56703 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
WNT3P56703 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
WNT3P56703 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
WNT3P56703 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.62■□□□□ 0.25
WNT3P56703 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
WNT3P56703 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.62■□□□□ 0.25
WNT3P56703 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.62■□□□□ 0.25
WNT3P56703 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.62■□□□□ 0.25
WNT3P56703 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
WNT3P56703 AL121894.2-201ENST00000602977 491 ntBASIC16.62■□□□□ 0.25
WNT3P56703 AC012313.10-201ENST00000623509 926 ntBASIC16.62■□□□□ 0.25
WNT3P56703 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
WNT3P56703 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.62■□□□□ 0.25
WNT3P56703 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
WNT3P56703 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.62■□□□□ 0.25
WNT3P56703 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
WNT3P56703 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
WNT3P56703 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.62■□□□□ 0.25
WNT3P56703 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
WNT3P56703 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
WNT3P56703 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.62■□□□□ 0.25
WNT3P56703 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.61■□□□□ 0.25
WNT3P56703 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
WNT3P56703 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
WNT3P56703 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.61■□□□□ 0.25
WNT3P56703 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
WNT3P56703 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
WNT3P56703 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
WNT3P56703 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
WNT3P56703 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
WNT3P56703 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
WNT3P56703 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
WNT3P56703 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
WNT3P56703 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
WNT3P56703 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
WNT3P56703 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.61■□□□□ 0.25
WNT3P56703 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
WNT3P56703 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.61■□□□□ 0.25
WNT3P56703 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.61■□□□□ 0.25
WNT3P56703 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.61■□□□□ 0.25
WNT3P56703 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.61■□□□□ 0.25
WNT3P56703 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.61■□□□□ 0.25
WNT3P56703 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.61■□□□□ 0.25
WNT3P56703 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
WNT3P56703 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
WNT3P56703 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
WNT3P56703 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
WNT3P56703 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
WNT3P56703 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
WNT3P56703 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.61■□□□□ 0.25
WNT3P56703 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
WNT3P56703 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
WNT3P56703 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.61■□□□□ 0.25
WNT3P56703 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
WNT3P56703 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
WNT3P56703 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
WNT3P56703 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
WNT3P56703 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
WNT3P56703 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
WNT3P56703 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
WNT3P56703 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
WNT3P56703 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.6■□□□□ 0.25
WNT3P56703 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
WNT3P56703 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
WNT3P56703 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.6■□□□□ 0.25
WNT3P56703 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
WNT3P56703 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
WNT3P56703 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
WNT3P56703 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.6■□□□□ 0.25
WNT3P56703 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
WNT3P56703 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.6■□□□□ 0.25
WNT3P56703 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms