Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RAD23BP54727 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAD23BP54727 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAD23BP54727 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.79■□□□□ 0.6
RAD23BP54727 AC133963.1-201ENST00000504166 1679 ntBASIC18.79■□□□□ 0.6
RAD23BP54727 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAD23BP54727 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAD23BP54727 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAD23BP54727 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
RAD23BP54727 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAD23BP54727 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.79■□□□□ 0.6
RAD23BP54727 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.79■□□□□ 0.6
RAD23BP54727 LINC00896-202ENST00000609602 2128 ntBASIC18.79■□□□□ 0.6
RAD23BP54727 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RAD23BP54727 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAD23BP54727 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAD23BP54727 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAD23BP54727 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAD23BP54727 TSPY19P-201ENST00000418461 509 ntBASIC18.79■□□□□ 0.6
RAD23BP54727 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.79■□□□□ 0.6
RAD23BP54727 TSPY18P-201ENST00000441642 509 ntBASIC18.79■□□□□ 0.6
RAD23BP54727 KRT16P4-201ENST00000453883 522 ntBASIC18.79■□□□□ 0.6
RAD23BP54727 PRELID1P1-202ENST00000567272 903 ntBASIC18.79■□□□□ 0.6
RAD23BP54727 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.79■□□□□ 0.6
RAD23BP54727 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.79■□□□□ 0.6
RAD23BP54727 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.79■□□□□ 0.6
RAD23BP54727 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.79■□□□□ 0.6
RAD23BP54727 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.79■□□□□ 0.6
RAD23BP54727 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.79■□□□□ 0.6
RAD23BP54727 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RAD23BP54727 AL049757.1-201ENST00000616842 1596 ntBASIC18.79■□□□□ 0.6
RAD23BP54727 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RAD23BP54727 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAD23BP54727 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
RAD23BP54727 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAD23BP54727 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.79■□□□□ 0.6
RAD23BP54727 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.79■□□□□ 0.6
RAD23BP54727 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAD23BP54727 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.78■□□□□ 0.6
RAD23BP54727 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.78■□□□□ 0.6
RAD23BP54727 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
RAD23BP54727 HLA-J-201ENST00000462773 1622 ntBASIC18.78■□□□□ 0.6
RAD23BP54727 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
RAD23BP54727 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAD23BP54727 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
RAD23BP54727 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAD23BP54727 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.78■□□□□ 0.6
RAD23BP54727 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
RAD23BP54727 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
RAD23BP54727 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAD23BP54727 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.78■□□□□ 0.6
RAD23BP54727 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.78■□□□□ 0.6
RAD23BP54727 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.78■□□□□ 0.6
RAD23BP54727 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAD23BP54727 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.78■□□□□ 0.6
RAD23BP54727 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.78■□□□□ 0.6
RAD23BP54727 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.78■□□□□ 0.6
RAD23BP54727 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
RAD23BP54727 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAD23BP54727 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.78■□□□□ 0.6
RAD23BP54727 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.78■□□□□ 0.6
RAD23BP54727 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.78■□□□□ 0.6
RAD23BP54727 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAD23BP54727 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RAD23BP54727 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAD23BP54727 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAD23BP54727 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RAD23BP54727 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.78■□□□□ 0.6
RAD23BP54727 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
RAD23BP54727 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.78■□□□□ 0.6
RAD23BP54727 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
RAD23BP54727 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
RAD23BP54727 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
RAD23BP54727 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
RAD23BP54727 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAD23BP54727 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAD23BP54727 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAD23BP54727 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAD23BP54727 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RAD23BP54727 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RAD23BP54727 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
RAD23BP54727 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.77■□□□□ 0.6
RAD23BP54727 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAD23BP54727 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAD23BP54727 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAD23BP54727 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.77■□□□□ 0.6
RAD23BP54727 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
RAD23BP54727 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAD23BP54727 AC103564.2-201ENST00000432853 1299 ntBASIC18.77■□□□□ 0.6
RAD23BP54727 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.77■□□□□ 0.6
RAD23BP54727 DUSP5P1-201ENST00000441325 1139 ntBASIC18.77■□□□□ 0.6
RAD23BP54727 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAD23BP54727 KRT18P31-201ENST00000506277 1292 ntBASIC18.77■□□□□ 0.6
RAD23BP54727 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.77■□□□□ 0.6
RAD23BP54727 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.77■□□□□ 0.6
RAD23BP54727 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.77■□□□□ 0.6
RAD23BP54727 AL732292.2-201ENST00000609649 430 ntBASIC18.77■□□□□ 0.6
RAD23BP54727 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.77■□□□□ 0.6
RAD23BP54727 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RAD23BP54727 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms