Protein–RNA interactions for Protein: P53539

FOSB, Protein fosB, humanhuman

Predictions only

Length 338 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOSBP53539 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
FOSBP53539 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
FOSBP53539 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
FOSBP53539 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
FOSBP53539 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
FOSBP53539 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
FOSBP53539 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FOSBP53539 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FOSBP53539 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
FOSBP53539 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
FOSBP53539 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
FOSBP53539 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FOSBP53539 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC20.56■□□□□ 0.88
FOSBP53539 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FOSBP53539 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FOSBP53539 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC20.56■□□□□ 0.88
FOSBP53539 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FOSBP53539 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FOSBP53539 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FOSBP53539 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC20.56■□□□□ 0.88
FOSBP53539 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FOSBP53539 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC20.56■□□□□ 0.88
FOSBP53539 DDT-203ENST00000403754 569 ntTSL 3 BASIC20.56■□□□□ 0.88
FOSBP53539 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FOSBP53539 DDT-206ENST00000430101 573 ntTSL 2 BASIC20.56■□□□□ 0.88
FOSBP53539 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC20.56■□□□□ 0.88
FOSBP53539 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
FOSBP53539 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC20.56■□□□□ 0.88
FOSBP53539 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
FOSBP53539 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
FOSBP53539 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FOSBP53539 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
FOSBP53539 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC20.56■□□□□ 0.88
FOSBP53539 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
FOSBP53539 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
FOSBP53539 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
FOSBP53539 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
FOSBP53539 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC20.56■□□□□ 0.88
FOSBP53539 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FOSBP53539 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
FOSBP53539 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
FOSBP53539 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
FOSBP53539 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
FOSBP53539 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC20.55■□□□□ 0.88
FOSBP53539 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
FOSBP53539 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
FOSBP53539 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
FOSBP53539 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
FOSBP53539 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
FOSBP53539 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC20.55■□□□□ 0.88
FOSBP53539 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC20.55■□□□□ 0.88
FOSBP53539 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC20.55■□□□□ 0.88
FOSBP53539 AC087388.1-201ENST00000571370 1112 ntBASIC20.55■□□□□ 0.88
FOSBP53539 AC011498.5-201ENST00000592027 486 ntBASIC20.55■□□□□ 0.88
FOSBP53539 AL592071.1-201ENST00000611956 408 ntBASIC20.55■□□□□ 0.88
FOSBP53539 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC20.55■□□□□ 0.88
FOSBP53539 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC20.55■□□□□ 0.88
FOSBP53539 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
FOSBP53539 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
FOSBP53539 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
FOSBP53539 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
FOSBP53539 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
FOSBP53539 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
FOSBP53539 AC005332.1-201ENST00000577698 1310 ntBASIC20.54■□□□□ 0.88
FOSBP53539 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
FOSBP53539 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
FOSBP53539 HLA-J-201ENST00000462773 1622 ntBASIC20.54■□□□□ 0.88
FOSBP53539 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
FOSBP53539 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
FOSBP53539 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
FOSBP53539 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
FOSBP53539 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC20.54■□□□□ 0.88
FOSBP53539 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
FOSBP53539 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
FOSBP53539 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
FOSBP53539 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
FOSBP53539 AC091607.1-201ENST00000490318 1060 ntBASIC20.54■□□□□ 0.88
FOSBP53539 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC20.54■□□□□ 0.88
FOSBP53539 LTBR-211ENST00000543190 785 ntTSL 3 BASIC20.54■□□□□ 0.88
FOSBP53539 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC20.54■□□□□ 0.88
FOSBP53539 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC20.54■□□□□ 0.88
FOSBP53539 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC20.54■□□□□ 0.88
FOSBP53539 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC20.54■□□□□ 0.88
FOSBP53539 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
FOSBP53539 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC20.54■□□□□ 0.88
FOSBP53539 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
FOSBP53539 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
FOSBP53539 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
FOSBP53539 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
FOSBP53539 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
FOSBP53539 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
FOSBP53539 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
FOSBP53539 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
FOSBP53539 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
FOSBP53539 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
FOSBP53539 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC20.54■□□□□ 0.88
FOSBP53539 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
FOSBP53539 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC20.53■□□□□ 0.88
FOSBP53539 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC20.53■□□□□ 0.88
FOSBP53539 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms