Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
NKX2-5P52952 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NKX2-5P52952 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NKX2-5P52952 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NKX2-5P52952 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
NKX2-5P52952 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
NKX2-5P52952 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NKX2-5P52952 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
NKX2-5P52952 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NKX2-5P52952 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NKX2-5P52952 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC14.97□□□□□ -0.01
NKX2-5P52952 MIR3621-201ENST00000580529 85 ntBASIC14.97□□□□□ -0.01
NKX2-5P52952 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NKX2-5P52952 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC14.97□□□□□ -0.01
NKX2-5P52952 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NKX2-5P52952 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
NKX2-5P52952 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NKX2-5P52952 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
NKX2-5P52952 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
NKX2-5P52952 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NKX2-5P52952 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NKX2-5P52952 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NKX2-5P52952 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
NKX2-5P52952 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
NKX2-5P52952 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NKX2-5P52952 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
NKX2-5P52952 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NKX2-5P52952 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NKX2-5P52952 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NKX2-5P52952 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NKX2-5P52952 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NKX2-5P52952 GPAT2P1-201ENST00000444924 1672 ntBASIC14.97□□□□□ -0.01
NKX2-5P52952 AC006058.4-201ENST00000624016 1670 ntBASIC14.97□□□□□ -0.01
NKX2-5P52952 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
NKX2-5P52952 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
NKX2-5P52952 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NKX2-5P52952 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NKX2-5P52952 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NKX2-5P52952 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
NKX2-5P52952 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NKX2-5P52952 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NKX2-5P52952 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NKX2-5P52952 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NKX2-5P52952 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NKX2-5P52952 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NKX2-5P52952 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NKX2-5P52952 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NKX2-5P52952 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NKX2-5P52952 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC14.96□□□□□ -0.01
NKX2-5P52952 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NKX2-5P52952 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.96□□□□□ -0.01
NKX2-5P52952 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.96□□□□□ -0.01
NKX2-5P52952 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NKX2-5P52952 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC14.96□□□□□ -0.01
NKX2-5P52952 AL512631.2-201ENST00000604634 923 ntBASIC14.96□□□□□ -0.01
NKX2-5P52952 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
NKX2-5P52952 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.96□□□□□ -0.01
NKX2-5P52952 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NKX2-5P52952 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NKX2-5P52952 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NKX2-5P52952 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC14.96□□□□□ -0.01
NKX2-5P52952 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NKX2-5P52952 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.96□□□□□ -0.02
NKX2-5P52952 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
NKX2-5P52952 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
NKX2-5P52952 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.96□□□□□ -0.02
NKX2-5P52952 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
NKX2-5P52952 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
NKX2-5P52952 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.96□□□□□ -0.02
NKX2-5P52952 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
NKX2-5P52952 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
NKX2-5P52952 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NKX2-5P52952 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.95□□□□□ -0.02
NKX2-5P52952 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC14.95□□□□□ -0.02
NKX2-5P52952 MPST-204ENST00000404393 1329 ntTSL 5 BASIC14.95□□□□□ -0.02
NKX2-5P52952 AC019069.1-201ENST00000610008 1333 ntBASIC14.95□□□□□ -0.02
NKX2-5P52952 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.95□□□□□ -0.02
NKX2-5P52952 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NKX2-5P52952 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NKX2-5P52952 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.95□□□□□ -0.02
NKX2-5P52952 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NKX2-5P52952 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NKX2-5P52952 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NKX2-5P52952 AC100803.2-201ENST00000562459 1963 ntBASIC14.95□□□□□ -0.02
NKX2-5P52952 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NKX2-5P52952 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NKX2-5P52952 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
NKX2-5P52952 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.95□□□□□ -0.02
NKX2-5P52952 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
NKX2-5P52952 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC14.95□□□□□ -0.02
NKX2-5P52952 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC14.95□□□□□ -0.02
NKX2-5P52952 KRT18P20-201ENST00000548986 1279 ntBASIC14.95□□□□□ -0.02
NKX2-5P52952 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC14.95□□□□□ -0.02
NKX2-5P52952 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC14.95□□□□□ -0.02
NKX2-5P52952 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NKX2-5P52952 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NKX2-5P52952 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
NKX2-5P52952 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.95□□□□□ -0.02
NKX2-5P52952 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NKX2-5P52952 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms