Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC12.02□□□□□ -0.49
PCP4P48539 AC005912.2-201ENST00000619492 2400 ntBASIC12.02□□□□□ -0.49
PCP4P48539 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
PCP4P48539 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
PCP4P48539 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC12.02□□□□□ -0.49
PCP4P48539 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
PCP4P48539 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
PCP4P48539 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
PCP4P48539 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
PCP4P48539 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
PCP4P48539 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
PCP4P48539 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC12.02□□□□□ -0.49
PCP4P48539 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
PCP4P48539 AC138028.4-201ENST00000564984 1845 ntBASIC12.02□□□□□ -0.49
PCP4P48539 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
PCP4P48539 PNPLA8-206ENST00000436062 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
PCP4P48539 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
PCP4P48539 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
PCP4P48539 USP40-201ENST00000251722 5692 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
PCP4P48539 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
PCP4P48539 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
PCP4P48539 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
PCP4P48539 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC12.01□□□□□ -0.49
PCP4P48539 GSN-215ENST00000545652 2428 ntTSL 2 BASIC12.01□□□□□ -0.49
PCP4P48539 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
PCP4P48539 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
PCP4P48539 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
PCP4P48539 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
PCP4P48539 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC12.01□□□□□ -0.49
PCP4P48539 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
PCP4P48539 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
PCP4P48539 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
PCP4P48539 FAM156B-201ENST00000416841 2537 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
PCP4P48539 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
PCP4P48539 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
PCP4P48539 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC12.01□□□□□ -0.49
PCP4P48539 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
PCP4P48539 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
PCP4P48539 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
PCP4P48539 DLGAP3-201ENST00000235180 3587 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
PCP4P48539 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC12.01□□□□□ -0.49
PCP4P48539 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
PCP4P48539 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
PCP4P48539 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
PCP4P48539 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
PCP4P48539 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
PCP4P48539 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC12.01□□□□□ -0.49
PCP4P48539 DOK4-210ENST00000566936 2851 ntTSL 3 BASIC12.01□□□□□ -0.49
PCP4P48539 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
PCP4P48539 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
PCP4P48539 HERC2P10-201ENST00000570209 2393 ntBASIC12.01□□□□□ -0.49
PCP4P48539 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
PCP4P48539 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
PCP4P48539 AMT-206ENST00000458307 1860 ntTSL 2 BASIC12.01□□□□□ -0.49
PCP4P48539 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC12.01□□□□□ -0.49
PCP4P48539 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
PCP4P48539 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
PCP4P48539 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
PCP4P48539 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC12.01□□□□□ -0.49
PCP4P48539 USP39-202ENST00000409025 1946 ntTSL 5 BASIC12.01□□□□□ -0.49
PCP4P48539 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
PCP4P48539 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC12.01□□□□□ -0.49
PCP4P48539 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC12.01□□□□□ -0.49
PCP4P48539 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
PCP4P48539 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
PCP4P48539 AC010547.1-201ENST00000500612 2793 ntTSL 2 BASIC12.01□□□□□ -0.49
PCP4P48539 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC12□□□□□ -0.49
PCP4P48539 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC12□□□□□ -0.49
PCP4P48539 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC12□□□□□ -0.49
PCP4P48539 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC12□□□□□ -0.49
PCP4P48539 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
PCP4P48539 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
PCP4P48539 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
PCP4P48539 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
PCP4P48539 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC12□□□□□ -0.49
PCP4P48539 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
PCP4P48539 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
PCP4P48539 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
PCP4P48539 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
PCP4P48539 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
PCP4P48539 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
PCP4P48539 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
PCP4P48539 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC12□□□□□ -0.49
PCP4P48539 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC12□□□□□ -0.49
PCP4P48539 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
PCP4P48539 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC12□□□□□ -0.49
PCP4P48539 METAP1-201ENST00000296411 2791 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
PCP4P48539 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
PCP4P48539 AC008556.1-201ENST00000610908 2040 ntBASIC12□□□□□ -0.49
PCP4P48539 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
PCP4P48539 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC12□□□□□ -0.49
PCP4P48539 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC12□□□□□ -0.49
PCP4P48539 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC12□□□□□ -0.49
PCP4P48539 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC12□□□□□ -0.49
PCP4P48539 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
PCP4P48539 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC12□□□□□ -0.49
PCP4P48539 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
PCP4P48539 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC12□□□□□ -0.49
PCP4P48539 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC12□□□□□ -0.49
PCP4P48539 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms