Protein–RNA interactions for Protein: P42261

GRIA1, Glutamate receptor 1, humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA1P42261 AC125634.1-201ENST00000438758 1403 ntBASIC17.82■□□□□ 0.44
GRIA1P42261 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GRIA1P42261 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
GRIA1P42261 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GRIA1P42261 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GRIA1P42261 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
GRIA1P42261 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
GRIA1P42261 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.82■□□□□ 0.44
GRIA1P42261 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
GRIA1P42261 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GRIA1P42261 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.82■□□□□ 0.44
GRIA1P42261 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.82■□□□□ 0.44
GRIA1P42261 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
GRIA1P42261 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.82■□□□□ 0.44
GRIA1P42261 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.82■□□□□ 0.44
GRIA1P42261 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
GRIA1P42261 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.82■□□□□ 0.44
GRIA1P42261 NTF6B-201ENST00000591913 560 ntBASIC17.82■□□□□ 0.44
GRIA1P42261 AL139327.4-201ENST00000612362 153 ntBASIC17.82■□□□□ 0.44
GRIA1P42261 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.82■□□□□ 0.44
GRIA1P42261 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GRIA1P42261 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
GRIA1P42261 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GRIA1P42261 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.82■□□□□ 0.44
GRIA1P42261 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GRIA1P42261 AC011676.5-201ENST00000624864 2660 ntBASIC17.82■□□□□ 0.44
GRIA1P42261 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
GRIA1P42261 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
GRIA1P42261 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
GRIA1P42261 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GRIA1P42261 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
GRIA1P42261 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
GRIA1P42261 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
GRIA1P42261 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
GRIA1P42261 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.81■□□□□ 0.44
GRIA1P42261 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
GRIA1P42261 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
GRIA1P42261 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.81■□□□□ 0.44
GRIA1P42261 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.81■□□□□ 0.44
GRIA1P42261 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.81■□□□□ 0.44
GRIA1P42261 AC005332.1-201ENST00000577698 1310 ntBASIC17.81■□□□□ 0.44
GRIA1P42261 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
GRIA1P42261 NKILA-202ENST00000614771 2598 ntBASIC17.81■□□□□ 0.44
GRIA1P42261 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
GRIA1P42261 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
GRIA1P42261 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GRIA1P42261 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.81■□□□□ 0.44
GRIA1P42261 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
GRIA1P42261 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
GRIA1P42261 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.81■□□□□ 0.44
GRIA1P42261 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
GRIA1P42261 IGHV3-41-201ENST00000613121 348 ntBASIC17.81■□□□□ 0.44
GRIA1P42261 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.81■□□□□ 0.44
GRIA1P42261 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
GRIA1P42261 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
GRIA1P42261 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GRIA1P42261 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.81■□□□□ 0.44
GRIA1P42261 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.81■□□□□ 0.44
GRIA1P42261 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
GRIA1P42261 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GRIA1P42261 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
GRIA1P42261 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GRIA1P42261 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
GRIA1P42261 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
GRIA1P42261 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.81■□□□□ 0.44
GRIA1P42261 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GRIA1P42261 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
GRIA1P42261 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.8■□□□□ 0.44
GRIA1P42261 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GRIA1P42261 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
GRIA1P42261 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
GRIA1P42261 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.8■□□□□ 0.44
GRIA1P42261 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
GRIA1P42261 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.8■□□□□ 0.44
GRIA1P42261 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
GRIA1P42261 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.8■□□□□ 0.44
GRIA1P42261 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.8■□□□□ 0.44
GRIA1P42261 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
GRIA1P42261 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
GRIA1P42261 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
GRIA1P42261 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
GRIA1P42261 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
GRIA1P42261 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.8■□□□□ 0.44
GRIA1P42261 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GRIA1P42261 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GRIA1P42261 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GRIA1P42261 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.8■□□□□ 0.44
GRIA1P42261 FAM86EP-206ENST00000510506 987 ntBASIC17.8■□□□□ 0.44
GRIA1P42261 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.8■□□□□ 0.44
GRIA1P42261 AC019129.2-201ENST00000609837 1235 ntBASIC17.8■□□□□ 0.44
GRIA1P42261 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.8■□□□□ 0.44
GRIA1P42261 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
GRIA1P42261 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.8■□□□□ 0.44
GRIA1P42261 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
GRIA1P42261 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GRIA1P42261 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
GRIA1P42261 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
GRIA1P42261 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GRIA1P42261 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
GRIA1P42261 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms