Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.56■□□□□ 0.56
RFC1P35251 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RFC1P35251 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RFC1P35251 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.56■□□□□ 0.56
RFC1P35251 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.56■□□□□ 0.56
RFC1P35251 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.56■□□□□ 0.56
RFC1P35251 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RFC1P35251 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RFC1P35251 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RFC1P35251 AL138688.1-201ENST00000624851 1594 ntBASIC18.55■□□□□ 0.56
RFC1P35251 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.55■□□□□ 0.56
RFC1P35251 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
RFC1P35251 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.55■□□□□ 0.56
RFC1P35251 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RFC1P35251 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RFC1P35251 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
RFC1P35251 KRT18P1-202ENST00000452408 1331 ntBASIC18.55■□□□□ 0.56
RFC1P35251 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RFC1P35251 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RFC1P35251 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
RFC1P35251 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RFC1P35251 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
RFC1P35251 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.55■□□□□ 0.56
RFC1P35251 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RFC1P35251 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RFC1P35251 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.55■□□□□ 0.56
RFC1P35251 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.55■□□□□ 0.56
RFC1P35251 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
RFC1P35251 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RFC1P35251 AC005104.2-201ENST00000427818 678 ntBASIC18.55■□□□□ 0.56
RFC1P35251 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.55■□□□□ 0.56
RFC1P35251 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.55■□□□□ 0.56
RFC1P35251 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
RFC1P35251 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
RFC1P35251 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RFC1P35251 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.55■□□□□ 0.56
RFC1P35251 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RFC1P35251 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RFC1P35251 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RFC1P35251 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RFC1P35251 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.55■□□□□ 0.56
RFC1P35251 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RFC1P35251 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RFC1P35251 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
RFC1P35251 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RFC1P35251 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
RFC1P35251 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RFC1P35251 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
RFC1P35251 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RFC1P35251 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
RFC1P35251 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RFC1P35251 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.54■□□□□ 0.56
RFC1P35251 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RFC1P35251 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.54■□□□□ 0.56
RFC1P35251 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
RFC1P35251 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RFC1P35251 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RFC1P35251 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RFC1P35251 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RFC1P35251 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RFC1P35251 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RFC1P35251 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.54■□□□□ 0.56
RFC1P35251 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RFC1P35251 AC108860.2-201ENST00000562760 2183 ntBASIC18.54■□□□□ 0.56
RFC1P35251 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RFC1P35251 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RFC1P35251 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.54■□□□□ 0.56
RFC1P35251 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RFC1P35251 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.54■□□□□ 0.56
RFC1P35251 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.54■□□□□ 0.56
RFC1P35251 AC246785.2-201ENST00000432512 513 ntBASIC18.54■□□□□ 0.56
RFC1P35251 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.54■□□□□ 0.56
RFC1P35251 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.54■□□□□ 0.56
RFC1P35251 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.54■□□□□ 0.56
RFC1P35251 TPSP2-201ENST00000561760 610 ntBASIC18.54■□□□□ 0.56
RFC1P35251 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.54■□□□□ 0.56
RFC1P35251 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
RFC1P35251 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RFC1P35251 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RFC1P35251 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
RFC1P35251 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RFC1P35251 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RFC1P35251 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.54■□□□□ 0.56
RFC1P35251 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
RFC1P35251 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RFC1P35251 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RFC1P35251 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.54■□□□□ 0.56
RFC1P35251 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.53■□□□□ 0.56
RFC1P35251 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RFC1P35251 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RFC1P35251 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.53■□□□□ 0.56
RFC1P35251 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
RFC1P35251 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
RFC1P35251 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.53■□□□□ 0.56
RFC1P35251 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RFC1P35251 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RFC1P35251 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RFC1P35251 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
RFC1P35251 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RFC1P35251 DRAXINP1-201ENST00000437611 948 ntBASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms