Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
XPAP23025 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
XPAP23025 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
XPAP23025 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
XPAP23025 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.75■□□□□ 0.43
XPAP23025 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.75■□□□□ 0.43
XPAP23025 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
XPAP23025 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.75■□□□□ 0.43
XPAP23025 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
XPAP23025 AC106795.1-205ENST00000512851 1056 ntBASIC17.75■□□□□ 0.43
XPAP23025 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.75■□□□□ 0.43
XPAP23025 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.75■□□□□ 0.43
XPAP23025 AC064862.7-201ENST00000604520 867 ntBASIC17.75■□□□□ 0.43
XPAP23025 AL355877.3-201ENST00000622820 899 ntBASIC17.75■□□□□ 0.43
XPAP23025 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
XPAP23025 SIRPAP1-201ENST00000448467 1770 ntBASIC17.75■□□□□ 0.43
XPAP23025 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.75■□□□□ 0.43
XPAP23025 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
XPAP23025 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
XPAP23025 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.75■□□□□ 0.43
XPAP23025 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
XPAP23025 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
XPAP23025 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.75■□□□□ 0.43
XPAP23025 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.75■□□□□ 0.43
XPAP23025 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
XPAP23025 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.75■□□□□ 0.43
XPAP23025 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
XPAP23025 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
XPAP23025 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
XPAP23025 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
XPAP23025 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
XPAP23025 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
XPAP23025 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
XPAP23025 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.74■□□□□ 0.43
XPAP23025 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
XPAP23025 KRT8P10-201ENST00000450021 1447 ntBASIC17.74■□□□□ 0.43
XPAP23025 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
XPAP23025 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
XPAP23025 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.74■□□□□ 0.43
XPAP23025 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
XPAP23025 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.74■□□□□ 0.43
XPAP23025 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
XPAP23025 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
XPAP23025 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
XPAP23025 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.74■□□□□ 0.43
XPAP23025 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.74■□□□□ 0.43
XPAP23025 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.74■□□□□ 0.43
XPAP23025 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
XPAP23025 IGHV3-52-201ENST00000519770 353 ntBASIC17.74■□□□□ 0.43
XPAP23025 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.74■□□□□ 0.43
XPAP23025 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
XPAP23025 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.74■□□□□ 0.43
XPAP23025 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
XPAP23025 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
XPAP23025 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
XPAP23025 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
XPAP23025 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
XPAP23025 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.74■□□□□ 0.43
XPAP23025 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.74■□□□□ 0.43
XPAP23025 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
XPAP23025 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.74■□□□□ 0.43
XPAP23025 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.74■□□□□ 0.43
XPAP23025 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.74■□□□□ 0.43
XPAP23025 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
XPAP23025 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
XPAP23025 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
XPAP23025 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.74■□□□□ 0.43
XPAP23025 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
XPAP23025 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.74■□□□□ 0.43
XPAP23025 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.74■□□□□ 0.43
XPAP23025 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
XPAP23025 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.73■□□□□ 0.43
XPAP23025 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
XPAP23025 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
XPAP23025 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
XPAP23025 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
XPAP23025 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
XPAP23025 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.73■□□□□ 0.43
XPAP23025 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
XPAP23025 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
XPAP23025 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.73■□□□□ 0.43
XPAP23025 FAM197Y8-203ENST00000450145 560 ntBASIC17.73■□□□□ 0.43
XPAP23025 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.73■□□□□ 0.43
XPAP23025 AC073648.2-201ENST00000510116 352 ntBASIC17.73■□□□□ 0.43
XPAP23025 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.73■□□□□ 0.43
XPAP23025 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
XPAP23025 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
XPAP23025 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
XPAP23025 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
XPAP23025 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
XPAP23025 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
XPAP23025 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
XPAP23025 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.73■□□□□ 0.43
XPAP23025 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
XPAP23025 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
XPAP23025 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.73■□□□□ 0.43
XPAP23025 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
XPAP23025 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
XPAP23025 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
XPAP23025 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms