Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.77■□□□□ 0.44
HLA-DPA1P20036 AC104819.1-201ENST00000504587 486 ntBASIC17.77■□□□□ 0.44
HLA-DPA1P20036 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.77■□□□□ 0.44
HLA-DPA1P20036 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.77■□□□□ 0.44
HLA-DPA1P20036 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.77■□□□□ 0.44
HLA-DPA1P20036 AC012615.1-201ENST00000565797 1299 ntBASIC17.77■□□□□ 0.44
HLA-DPA1P20036 AC011467.2-201ENST00000598425 242 ntBASIC17.77■□□□□ 0.44
HLA-DPA1P20036 AC092119.3-201ENST00000612618 583 ntBASIC17.77■□□□□ 0.44
HLA-DPA1P20036 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.77■□□□□ 0.44
HLA-DPA1P20036 AC093458.2-201ENST00000623150 629 ntBASIC17.77■□□□□ 0.44
HLA-DPA1P20036 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
HLA-DPA1P20036 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
HLA-DPA1P20036 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
HLA-DPA1P20036 AC026471.1-201ENST00000564629 3026 ntBASIC17.77■□□□□ 0.43
HLA-DPA1P20036 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HLA-DPA1P20036 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HLA-DPA1P20036 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HLA-DPA1P20036 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.76■□□□□ 0.43
HLA-DPA1P20036 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HLA-DPA1P20036 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
HLA-DPA1P20036 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
HLA-DPA1P20036 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
HLA-DPA1P20036 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HLA-DPA1P20036 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HLA-DPA1P20036 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
HLA-DPA1P20036 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HLA-DPA1P20036 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HLA-DPA1P20036 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.76■□□□□ 0.43
HLA-DPA1P20036 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
HLA-DPA1P20036 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HLA-DPA1P20036 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.76■□□□□ 0.43
HLA-DPA1P20036 AP000867.3-201ENST00000524675 377 ntBASIC17.76■□□□□ 0.43
HLA-DPA1P20036 AC074051.2-201ENST00000565115 352 ntBASIC17.76■□□□□ 0.43
HLA-DPA1P20036 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.76■□□□□ 0.43
HLA-DPA1P20036 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HLA-DPA1P20036 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HLA-DPA1P20036 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
HLA-DPA1P20036 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HLA-DPA1P20036 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HLA-DPA1P20036 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HLA-DPA1P20036 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
HLA-DPA1P20036 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HLA-DPA1P20036 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HLA-DPA1P20036 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.76■□□□□ 0.43
HLA-DPA1P20036 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HLA-DPA1P20036 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
HLA-DPA1P20036 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
HLA-DPA1P20036 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HLA-DPA1P20036 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HLA-DPA1P20036 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.76■□□□□ 0.43
HLA-DPA1P20036 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
HLA-DPA1P20036 TP73-AS1-210ENST00000637775 1455 ntBASIC17.75■□□□□ 0.43
HLA-DPA1P20036 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.75■□□□□ 0.43
HLA-DPA1P20036 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HLA-DPA1P20036 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HLA-DPA1P20036 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
HLA-DPA1P20036 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HLA-DPA1P20036 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HLA-DPA1P20036 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
HLA-DPA1P20036 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HLA-DPA1P20036 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.75■□□□□ 0.43
HLA-DPA1P20036 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HLA-DPA1P20036 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HLA-DPA1P20036 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
HLA-DPA1P20036 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HLA-DPA1P20036 MYCLP1-201ENST00000372451 1075 ntBASIC17.75■□□□□ 0.43
HLA-DPA1P20036 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
HLA-DPA1P20036 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.75■□□□□ 0.43
HLA-DPA1P20036 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HLA-DPA1P20036 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HLA-DPA1P20036 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC17.75■□□□□ 0.43
HLA-DPA1P20036 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HLA-DPA1P20036 IGHV3-52-201ENST00000519770 353 ntBASIC17.75■□□□□ 0.43
HLA-DPA1P20036 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HLA-DPA1P20036 AC019129.2-201ENST00000609837 1235 ntBASIC17.75■□□□□ 0.43
HLA-DPA1P20036 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HLA-DPA1P20036 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.75■□□□□ 0.43
HLA-DPA1P20036 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HLA-DPA1P20036 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HLA-DPA1P20036 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HLA-DPA1P20036 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
HLA-DPA1P20036 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HLA-DPA1P20036 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HLA-DPA1P20036 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.75■□□□□ 0.43
HLA-DPA1P20036 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
HLA-DPA1P20036 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HLA-DPA1P20036 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HLA-DPA1P20036 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.75■□□□□ 0.43
HLA-DPA1P20036 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
HLA-DPA1P20036 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.74■□□□□ 0.43
HLA-DPA1P20036 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
HLA-DPA1P20036 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HLA-DPA1P20036 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HLA-DPA1P20036 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
HLA-DPA1P20036 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HLA-DPA1P20036 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
HLA-DPA1P20036 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HLA-DPA1P20036 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HLA-DPA1P20036 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
HLA-DPA1P20036 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms