Protein–RNA interactions for Protein: P12814

ACTN1, Alpha-actinin-1, humanhuman

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1P12814 AL139288.1-201ENST00000623748 933 ntBASIC19.72■□□□□ 0.75
ACTN1P12814 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ACTN1P12814 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
ACTN1P12814 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
ACTN1P12814 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
ACTN1P12814 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ACTN1P12814 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
ACTN1P12814 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
ACTN1P12814 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
ACTN1P12814 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
ACTN1P12814 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ACTN1P12814 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
ACTN1P12814 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC19.71■□□□□ 0.75
ACTN1P12814 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ACTN1P12814 AC125634.1-201ENST00000438758 1403 ntBASIC19.71■□□□□ 0.75
ACTN1P12814 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ACTN1P12814 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ACTN1P12814 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC19.71■□□□□ 0.75
ACTN1P12814 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC19.71■□□□□ 0.75
ACTN1P12814 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ACTN1P12814 RPS8P6-201ENST00000426177 609 ntBASIC19.71■□□□□ 0.75
ACTN1P12814 HMGN1P19-201ENST00000436976 333 ntBASIC19.71■□□□□ 0.75
ACTN1P12814 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC19.71■□□□□ 0.75
ACTN1P12814 URGCP-206ENST00000446958 365 ntTSL 2 BASIC19.71■□□□□ 0.75
ACTN1P12814 RNA5SP416-201ENST00000516838 111 ntBASIC19.71■□□□□ 0.75
ACTN1P12814 DHDH-204ENST00000523250 634 ntTSL 5 BASIC19.71■□□□□ 0.75
ACTN1P12814 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC19.71■□□□□ 0.75
ACTN1P12814 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC19.71■□□□□ 0.75
ACTN1P12814 AL355385.1-201ENST00000606123 409 ntBASIC19.71■□□□□ 0.75
ACTN1P12814 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
ACTN1P12814 AC008735.5-201ENST00000623544 497 ntBASIC19.71■□□□□ 0.75
ACTN1P12814 AC093010.1-201ENST00000473625 1624 ntBASIC19.71■□□□□ 0.75
ACTN1P12814 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.71■□□□□ 0.75
ACTN1P12814 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
ACTN1P12814 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
ACTN1P12814 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC19.71■□□□□ 0.75
ACTN1P12814 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
ACTN1P12814 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
ACTN1P12814 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.71■□□□□ 0.75
ACTN1P12814 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ACTN1P12814 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ACTN1P12814 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ACTN1P12814 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
ACTN1P12814 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ACTN1P12814 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.7■□□□□ 0.74
ACTN1P12814 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ACTN1P12814 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ACTN1P12814 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ACTN1P12814 YBX2P1-201ENST00000394192 760 ntBASIC19.7■□□□□ 0.74
ACTN1P12814 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC19.7■□□□□ 0.74
ACTN1P12814 HS6ST1P1-201ENST00000481504 1234 ntBASIC19.7■□□□□ 0.74
ACTN1P12814 COX5A-202ENST00000562233 441 ntTSL 3 BASIC19.7■□□□□ 0.74
ACTN1P12814 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.7■□□□□ 0.74
ACTN1P12814 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ACTN1P12814 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC19.7■□□□□ 0.74
ACTN1P12814 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ACTN1P12814 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ACTN1P12814 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ACTN1P12814 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.7■□□□□ 0.74
ACTN1P12814 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ACTN1P12814 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ACTN1P12814 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.7■□□□□ 0.74
ACTN1P12814 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ACTN1P12814 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
ACTN1P12814 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ACTN1P12814 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC19.69■□□□□ 0.74
ACTN1P12814 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC19.69■□□□□ 0.74
ACTN1P12814 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ACTN1P12814 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.69■□□□□ 0.74
ACTN1P12814 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.69■□□□□ 0.74
ACTN1P12814 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ACTN1P12814 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ACTN1P12814 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.69■□□□□ 0.74
ACTN1P12814 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.69■□□□□ 0.74
ACTN1P12814 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ACTN1P12814 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ACTN1P12814 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
ACTN1P12814 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ACTN1P12814 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
ACTN1P12814 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ACTN1P12814 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ACTN1P12814 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC19.69■□□□□ 0.74
ACTN1P12814 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ACTN1P12814 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC19.69■□□□□ 0.74
ACTN1P12814 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC19.69■□□□□ 0.74
ACTN1P12814 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ACTN1P12814 AC004967.1-201ENST00000453589 447 ntBASIC19.69■□□□□ 0.74
ACTN1P12814 AC105339.3-201ENST00000560043 636 ntBASIC19.69■□□□□ 0.74
ACTN1P12814 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC19.69■□□□□ 0.74
ACTN1P12814 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ACTN1P12814 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC19.69■□□□□ 0.74
ACTN1P12814 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC19.69■□□□□ 0.74
ACTN1P12814 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ACTN1P12814 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ACTN1P12814 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
ACTN1P12814 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
ACTN1P12814 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ACTN1P12814 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ACTN1P12814 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ACTN1P12814 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms