Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC30.42■■■□□ 2.46
TOP2AP11388 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC30.42■■■□□ 2.46
TOP2AP11388 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC30.42■■■□□ 2.46
TOP2AP11388 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC30.42■■■□□ 2.46
TOP2AP11388 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
TOP2AP11388 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC30.42■■■□□ 2.46
TOP2AP11388 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC30.42■■■□□ 2.46
TOP2AP11388 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC30.42■■■□□ 2.46
TOP2AP11388 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC30.42■■■□□ 2.46
TOP2AP11388 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
TOP2AP11388 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
TOP2AP11388 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
TOP2AP11388 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC30.42■■■□□ 2.46
TOP2AP11388 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
TOP2AP11388 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC30.42■■■□□ 2.46
TOP2AP11388 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC30.42■■■□□ 2.46
TOP2AP11388 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC30.41■■■□□ 2.46
TOP2AP11388 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC30.41■■■□□ 2.46
TOP2AP11388 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC30.41■■■□□ 2.46
TOP2AP11388 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC30.41■■■□□ 2.46
TOP2AP11388 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC30.41■■■□□ 2.46
TOP2AP11388 LINC00304-203ENST00000565008 1864 ntBASIC30.41■■■□□ 2.46
TOP2AP11388 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC30.41■■■□□ 2.46
TOP2AP11388 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC30.41■■■□□ 2.46
TOP2AP11388 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
TOP2AP11388 AL512356.2-201ENST00000546955 174 ntBASIC30.41■■■□□ 2.46
TOP2AP11388 TSFM-210ENST00000550559 897 ntTSL 5 BASIC30.41■■■□□ 2.46
TOP2AP11388 AC243562.1-201ENST00000560672 389 ntBASIC30.41■■■□□ 2.46
TOP2AP11388 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC30.41■■■□□ 2.46
TOP2AP11388 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
TOP2AP11388 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC30.41■■■□□ 2.46
TOP2AP11388 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC30.41■■■□□ 2.46
TOP2AP11388 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC30.41■■■□□ 2.46
TOP2AP11388 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC30.41■■■□□ 2.46
TOP2AP11388 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
TOP2AP11388 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC30.4■■■□□ 2.46
TOP2AP11388 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
TOP2AP11388 HLA-DRB6-201ENST00000411500 1235 ntBASIC30.4■■■□□ 2.46
TOP2AP11388 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC30.4■■■□□ 2.46
TOP2AP11388 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC30.4■■■□□ 2.46
TOP2AP11388 AC093214.1-201ENST00000511688 1107 ntBASIC30.4■■■□□ 2.46
TOP2AP11388 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC30.4■■■□□ 2.46
TOP2AP11388 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC30.4■■■□□ 2.46
TOP2AP11388 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC30.4■■■□□ 2.46
TOP2AP11388 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC30.39■■■□□ 2.46
TOP2AP11388 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC30.39■■■□□ 2.46
TOP2AP11388 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
TOP2AP11388 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
TOP2AP11388 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC30.39■■■□□ 2.46
TOP2AP11388 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC30.39■■■□□ 2.46
TOP2AP11388 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC30.39■■■□□ 2.46
TOP2AP11388 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC30.39■■■□□ 2.46
TOP2AP11388 NMU-203ENST00000507338 658 ntTSL 3 BASIC30.39■■■□□ 2.46
TOP2AP11388 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
TOP2AP11388 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC30.39■■■□□ 2.46
TOP2AP11388 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC30.39■■■□□ 2.46
TOP2AP11388 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
TOP2AP11388 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC30.39■■■□□ 2.46
TOP2AP11388 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC30.39■■■□□ 2.46
TOP2AP11388 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC30.39■■■□□ 2.46
TOP2AP11388 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC30.39■■■□□ 2.45
TOP2AP11388 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.45
TOP2AP11388 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC30.39■■■□□ 2.45
TOP2AP11388 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC30.38■■■□□ 2.45
TOP2AP11388 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
TOP2AP11388 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC30.38■■■□□ 2.45
TOP2AP11388 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC30.38■■■□□ 2.45
TOP2AP11388 FAM86C2P-203ENST00000528684 1004 ntBASIC30.38■■■□□ 2.45
TOP2AP11388 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC30.38■■■□□ 2.45
TOP2AP11388 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC30.38■■■□□ 2.45
TOP2AP11388 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC30.38■■■□□ 2.45
TOP2AP11388 DUX4L27-201ENST00000554796 1261 ntBASIC30.38■■■□□ 2.45
TOP2AP11388 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC30.38■■■□□ 2.45
TOP2AP11388 MIR4745-201ENST00000577608 62 ntBASIC30.38■■■□□ 2.45
TOP2AP11388 YTHDF3-AS1-201ENST00000603538 718 ntBASIC30.38■■■□□ 2.45
TOP2AP11388 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
TOP2AP11388 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
TOP2AP11388 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC30.38■■■□□ 2.45
TOP2AP11388 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
TOP2AP11388 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
TOP2AP11388 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
TOP2AP11388 AKAP8P1-201ENST00000434743 1349 ntBASIC30.38■■■□□ 2.45
TOP2AP11388 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
TOP2AP11388 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC30.38■■■□□ 2.45
TOP2AP11388 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC30.38■■■□□ 2.45
TOP2AP11388 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
TOP2AP11388 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
TOP2AP11388 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
TOP2AP11388 SPDYE14P-201ENST00000442619 822 ntBASIC30.37■■■□□ 2.45
TOP2AP11388 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC30.37■■■□□ 2.45
TOP2AP11388 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC30.37■■■□□ 2.45
TOP2AP11388 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC30.37■■■□□ 2.45
TOP2AP11388 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC30.37■■■□□ 2.45
TOP2AP11388 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
TOP2AP11388 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC30.37■■■□□ 2.45
TOP2AP11388 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC30.37■■■□□ 2.45
TOP2AP11388 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
TOP2AP11388 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC30.37■■■□□ 2.45
TOP2AP11388 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC30.37■■■□□ 2.45
TOP2AP11388 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC30.37■■■□□ 2.45
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms