Protein–RNA interactions for Protein: P10826

RARB, Retinoic acid receptor beta, humanhuman

Predictions only

Length 455 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARBP10826 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RARBP10826 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RARBP10826 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RARBP10826 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RARBP10826 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
RARBP10826 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.62■□□□□ 0.73
RARBP10826 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.62■□□□□ 0.73
RARBP10826 AC025580.3-201ENST00000617932 1424 ntBASIC19.62■□□□□ 0.73
RARBP10826 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RARBP10826 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RARBP10826 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RARBP10826 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
RARBP10826 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RARBP10826 NEK7-201ENST00000367383 586 ntTSL 2 BASIC19.62■□□□□ 0.73
RARBP10826 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
RARBP10826 DDT-204ENST00000404092 805 ntTSL 3 BASIC19.62■□□□□ 0.73
RARBP10826 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC19.62■□□□□ 0.73
RARBP10826 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC19.62■□□□□ 0.73
RARBP10826 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
RARBP10826 AC093028.1-201ENST00000622998 982 ntBASIC19.62■□□□□ 0.73
RARBP10826 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RARBP10826 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
RARBP10826 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.62■□□□□ 0.73
RARBP10826 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC19.62■□□□□ 0.73
RARBP10826 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RARBP10826 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RARBP10826 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RARBP10826 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RARBP10826 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC19.61■□□□□ 0.73
RARBP10826 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RARBP10826 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RARBP10826 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RARBP10826 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RARBP10826 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RARBP10826 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RARBP10826 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
RARBP10826 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RARBP10826 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RARBP10826 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RARBP10826 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RARBP10826 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RARBP10826 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC19.61■□□□□ 0.73
RARBP10826 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC19.61■□□□□ 0.73
RARBP10826 OR7E47P-204ENST00000575924 449 ntBASIC19.61■□□□□ 0.73
RARBP10826 AC023141.13-201ENST00000604991 943 ntBASIC19.61■□□□□ 0.73
RARBP10826 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC19.61■□□□□ 0.73
RARBP10826 AL353135.1-201ENST00000606729 504 ntBASIC19.61■□□□□ 0.73
RARBP10826 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC19.61■□□□□ 0.73
RARBP10826 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.61■□□□□ 0.73
RARBP10826 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
RARBP10826 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RARBP10826 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RARBP10826 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RARBP10826 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.61■□□□□ 0.73
RARBP10826 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RARBP10826 BX276092.7-203ENST00000637198 1536 ntBASIC19.61■□□□□ 0.73
RARBP10826 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
RARBP10826 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RARBP10826 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RARBP10826 AC073592.3-201ENST00000625118 1834 ntBASIC19.6■□□□□ 0.73
RARBP10826 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RARBP10826 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RARBP10826 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RARBP10826 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC19.6■□□□□ 0.73
RARBP10826 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RARBP10826 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RARBP10826 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RARBP10826 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RARBP10826 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC19.6■□□□□ 0.73
RARBP10826 WDR53-203ENST00000429115 683 ntTSL 2 BASIC19.6■□□□□ 0.73
RARBP10826 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RARBP10826 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC19.6■□□□□ 0.73
RARBP10826 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
RARBP10826 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RARBP10826 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
RARBP10826 AC091812.2-201ENST00000619081 385 ntBASIC19.6■□□□□ 0.73
RARBP10826 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RARBP10826 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC19.6■□□□□ 0.73
RARBP10826 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
RARBP10826 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
RARBP10826 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RARBP10826 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RARBP10826 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RARBP10826 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RARBP10826 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RARBP10826 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
RARBP10826 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RARBP10826 AC009336.1-201ENST00000608941 1553 ntBASIC19.59■□□□□ 0.73
RARBP10826 LINC00982-205ENST00000420957 435 ntBASIC19.59■□□□□ 0.73
RARBP10826 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC19.59■□□□□ 0.73
RARBP10826 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RARBP10826 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RARBP10826 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.59■□□□□ 0.73
RARBP10826 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC19.59■□□□□ 0.73
RARBP10826 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
RARBP10826 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC19.59■□□□□ 0.73
RARBP10826 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.59■□□□□ 0.73
RARBP10826 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.59■□□□□ 0.73
RARBP10826 CITED2-204ENST00000618718 901 ntTSL 2 BASIC19.59■□□□□ 0.73
RARBP10826 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms