Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD74P04233 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC14.81□□□□□ -0.04
CD74P04233 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CD74P04233 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC14.81□□□□□ -0.04
CD74P04233 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD74P04233 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC14.81□□□□□ -0.04
CD74P04233 AC022188.1-201ENST00000620960 1664 ntBASIC14.81□□□□□ -0.04
CD74P04233 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CD74P04233 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CD74P04233 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
CD74P04233 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CD74P04233 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CD74P04233 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CD74P04233 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.8□□□□□ -0.04
CD74P04233 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CD74P04233 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CD74P04233 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CD74P04233 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.8□□□□□ -0.04
CD74P04233 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CD74P04233 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CD74P04233 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CD74P04233 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CD74P04233 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC14.8□□□□□ -0.04
CD74P04233 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CD74P04233 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CD74P04233 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC14.8□□□□□ -0.04
CD74P04233 CRYGFP-201ENST00000418459 633 ntBASIC14.8□□□□□ -0.04
CD74P04233 KRT18P65-201ENST00000439811 1286 ntBASIC14.8□□□□□ -0.04
CD74P04233 TSPY17P-201ENST00000450329 467 ntBASIC14.8□□□□□ -0.04
CD74P04233 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CD74P04233 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC14.8□□□□□ -0.04
CD74P04233 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC14.8□□□□□ -0.04
CD74P04233 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CD74P04233 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC14.8□□□□□ -0.04
CD74P04233 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CD74P04233 CD177P1-201ENST00000606252 935 ntBASIC14.8□□□□□ -0.04
CD74P04233 AL139327.4-201ENST00000612362 153 ntBASIC14.8□□□□□ -0.04
CD74P04233 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC14.8□□□□□ -0.04
CD74P04233 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CD74P04233 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CD74P04233 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CD74P04233 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CD74P04233 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CD74P04233 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
CD74P04233 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
CD74P04233 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CD74P04233 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CD74P04233 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CD74P04233 AC092053.1-201ENST00000605787 1936 ntBASIC14.8□□□□□ -0.04
CD74P04233 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
CD74P04233 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
CD74P04233 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.8□□□□□ -0.04
CD74P04233 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CD74P04233 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CD74P04233 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CD74P04233 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CD74P04233 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC14.79□□□□□ -0.04
CD74P04233 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CD74P04233 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CD74P04233 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
CD74P04233 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CD74P04233 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CD74P04233 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CD74P04233 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CD74P04233 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC14.79□□□□□ -0.04
CD74P04233 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC14.79□□□□□ -0.04
CD74P04233 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CD74P04233 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CD74P04233 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CD74P04233 AL513523.2-202ENST00000427283 2040 ntBASIC14.79□□□□□ -0.04
CD74P04233 SLC25A1P2-201ENST00000430693 912 ntBASIC14.79□□□□□ -0.04
CD74P04233 PHB2-202ENST00000440277 996 ntTSL 5 BASIC14.79□□□□□ -0.04
CD74P04233 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC14.79□□□□□ -0.04
CD74P04233 NUDT16P1-203ENST00000513809 620 ntBASIC14.79□□□□□ -0.04
CD74P04233 DENND3-207ENST00000518347 850 ntTSL 2 BASIC14.79□□□□□ -0.04
CD74P04233 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CD74P04233 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CD74P04233 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC14.79□□□□□ -0.04
CD74P04233 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CD74P04233 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
CD74P04233 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC14.79□□□□□ -0.04
CD74P04233 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CD74P04233 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CD74P04233 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CD74P04233 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
CD74P04233 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
CD74P04233 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD74P04233 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CD74P04233 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD74P04233 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
CD74P04233 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
CD74P04233 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD74P04233 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CD74P04233 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CD74P04233 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CD74P04233 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC14.78□□□□□ -0.04
CD74P04233 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD74P04233 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD74P04233 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC14.78□□□□□ -0.04
CD74P04233 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms