Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.46■□□□□ 0.23
PDGFAP04085 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDGFAP04085 AC107918.4-202ENST00000641623 219 ntBASIC16.46■□□□□ 0.23
PDGFAP04085 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDGFAP04085 CROCCP3-202ENST00000420820 1947 ntBASIC16.46■□□□□ 0.23
PDGFAP04085 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
PDGFAP04085 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.46■□□□□ 0.23
PDGFAP04085 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDGFAP04085 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PDGFAP04085 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PDGFAP04085 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDGFAP04085 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
PDGFAP04085 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PDGFAP04085 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDGFAP04085 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
PDGFAP04085 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
PDGFAP04085 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
PDGFAP04085 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
PDGFAP04085 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
PDGFAP04085 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
PDGFAP04085 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
PDGFAP04085 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.46■□□□□ 0.22
PDGFAP04085 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.45■□□□□ 0.22
PDGFAP04085 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PDGFAP04085 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.45■□□□□ 0.22
PDGFAP04085 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC16.45■□□□□ 0.22
PDGFAP04085 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDGFAP04085 AL391005.1-201ENST00000623953 2435 ntBASIC16.45■□□□□ 0.22
PDGFAP04085 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDGFAP04085 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDGFAP04085 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
PDGFAP04085 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDGFAP04085 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.45■□□□□ 0.22
PDGFAP04085 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.45■□□□□ 0.22
PDGFAP04085 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PDGFAP04085 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.45■□□□□ 0.22
PDGFAP04085 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.45■□□□□ 0.22
PDGFAP04085 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.45■□□□□ 0.22
PDGFAP04085 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.45■□□□□ 0.22
PDGFAP04085 AC027796.2-201ENST00000575326 344 ntBASIC16.45■□□□□ 0.22
PDGFAP04085 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.45■□□□□ 0.22
PDGFAP04085 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.45■□□□□ 0.22
PDGFAP04085 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PDGFAP04085 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDGFAP04085 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDGFAP04085 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.45■□□□□ 0.22
PDGFAP04085 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDGFAP04085 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PDGFAP04085 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDGFAP04085 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDGFAP04085 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDGFAP04085 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDGFAP04085 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
PDGFAP04085 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDGFAP04085 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
PDGFAP04085 AC008894.3-201ENST00000624324 3103 ntBASIC16.45■□□□□ 0.22
PDGFAP04085 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDGFAP04085 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.45■□□□□ 0.22
PDGFAP04085 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDGFAP04085 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDGFAP04085 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDGFAP04085 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDGFAP04085 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDGFAP04085 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
PDGFAP04085 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.44■□□□□ 0.22
PDGFAP04085 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDGFAP04085 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDGFAP04085 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDGFAP04085 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDGFAP04085 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDGFAP04085 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.44■□□□□ 0.22
PDGFAP04085 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.44■□□□□ 0.22
PDGFAP04085 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.44■□□□□ 0.22
PDGFAP04085 KRT18P65-201ENST00000439811 1286 ntBASIC16.44■□□□□ 0.22
PDGFAP04085 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.44■□□□□ 0.22
PDGFAP04085 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDGFAP04085 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.44■□□□□ 0.22
PDGFAP04085 AC040169.1-201ENST00000565382 521 ntBASIC16.44■□□□□ 0.22
PDGFAP04085 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.44■□□□□ 0.22
PDGFAP04085 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.44■□□□□ 0.22
PDGFAP04085 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PDGFAP04085 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
PDGFAP04085 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.44■□□□□ 0.22
PDGFAP04085 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
PDGFAP04085 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC16.44■□□□□ 0.22
PDGFAP04085 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDGFAP04085 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.44■□□□□ 0.22
PDGFAP04085 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.44■□□□□ 0.22
PDGFAP04085 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
PDGFAP04085 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
PDGFAP04085 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDGFAP04085 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.44■□□□□ 0.22
PDGFAP04085 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.44■□□□□ 0.22
PDGFAP04085 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PDGFAP04085 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PDGFAP04085 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.43■□□□□ 0.22
PDGFAP04085 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.43■□□□□ 0.22
PDGFAP04085 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PDGFAP04085 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
PDGFAP04085 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms