Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC19.23■□□□□ 0.67
VTNP04004 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC19.23■□□□□ 0.67
VTNP04004 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC19.23■□□□□ 0.67
VTNP04004 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC19.23■□□□□ 0.67
VTNP04004 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC19.23■□□□□ 0.67
VTNP04004 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC19.23■□□□□ 0.67
VTNP04004 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC19.23■□□□□ 0.67
VTNP04004 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
VTNP04004 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VTNP04004 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC19.23■□□□□ 0.67
VTNP04004 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
VTNP04004 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VTNP04004 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VTNP04004 AL354751.1-201ENST00000412768 1863 ntBASIC19.22■□□□□ 0.67
VTNP04004 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.22■□□□□ 0.67
VTNP04004 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.22■□□□□ 0.67
VTNP04004 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
VTNP04004 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VTNP04004 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VTNP04004 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VTNP04004 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
VTNP04004 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VTNP04004 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
VTNP04004 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC19.22■□□□□ 0.67
VTNP04004 SLC4A1APP2-201ENST00000424054 1259 ntBASIC19.22■□□□□ 0.67
VTNP04004 AC005104.2-201ENST00000427818 678 ntBASIC19.22■□□□□ 0.67
VTNP04004 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
VTNP04004 RNA5SP416-201ENST00000516838 111 ntBASIC19.22■□□□□ 0.67
VTNP04004 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC19.22■□□□□ 0.67
VTNP04004 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC19.22■□□□□ 0.67
VTNP04004 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
VTNP04004 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VTNP04004 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VTNP04004 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VTNP04004 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
VTNP04004 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
VTNP04004 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
VTNP04004 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
VTNP04004 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
VTNP04004 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
VTNP04004 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.22■□□□□ 0.67
VTNP04004 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
VTNP04004 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
VTNP04004 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VTNP04004 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
VTNP04004 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC19.21■□□□□ 0.67
VTNP04004 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC19.21■□□□□ 0.67
VTNP04004 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VTNP04004 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VTNP04004 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VTNP04004 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VTNP04004 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VTNP04004 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VTNP04004 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC19.21■□□□□ 0.67
VTNP04004 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VTNP04004 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
VTNP04004 MYCLP1-201ENST00000372451 1075 ntBASIC19.21■□□□□ 0.67
VTNP04004 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VTNP04004 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VTNP04004 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
VTNP04004 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC19.21■□□□□ 0.67
VTNP04004 RPS15P9-201ENST00000494093 319 ntBASIC19.21■□□□□ 0.67
VTNP04004 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC19.21■□□□□ 0.67
VTNP04004 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
VTNP04004 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
VTNP04004 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
VTNP04004 AC064836.3-201ENST00000607928 673 ntBASIC19.21■□□□□ 0.67
VTNP04004 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC19.21■□□□□ 0.67
VTNP04004 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC19.21■□□□□ 0.67
VTNP04004 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VTNP04004 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.21■□□□□ 0.67
VTNP04004 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
VTNP04004 AC135050.7-201ENST00000624508 2218 ntBASIC19.21■□□□□ 0.67
VTNP04004 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC19.21■□□□□ 0.67
VTNP04004 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VTNP04004 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VTNP04004 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
VTNP04004 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC19.21■□□□□ 0.67
VTNP04004 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC19.21■□□□□ 0.67
VTNP04004 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
VTNP04004 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
VTNP04004 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.21■□□□□ 0.67
VTNP04004 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
VTNP04004 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
VTNP04004 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC19.21■□□□□ 0.67
VTNP04004 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
VTNP04004 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
VTNP04004 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VTNP04004 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
VTNP04004 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
VTNP04004 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VTNP04004 BEX3-201ENST00000361298 921 ntTSL 2 BASIC19.2■□□□□ 0.66
VTNP04004 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC19.2■□□□□ 0.66
VTNP04004 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
VTNP04004 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
VTNP04004 MIR1233-2-201ENST00000408138 82 ntBASIC19.2■□□□□ 0.66
VTNP04004 MIR1233-1-201ENST00000408722 82 ntBASIC19.2■□□□□ 0.66
VTNP04004 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
VTNP04004 LINC00982-205ENST00000420957 435 ntBASIC19.2■□□□□ 0.66
VTNP04004 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms