Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.04■□□□□ 0.48
MT-CO1P00395 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.04■□□□□ 0.48
MT-CO1P00395 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MT-CO1P00395 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MT-CO1P00395 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MT-CO1P00395 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.04■□□□□ 0.48
MT-CO1P00395 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18.04■□□□□ 0.48
MT-CO1P00395 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
MT-CO1P00395 AL160237.2-201ENST00000556165 472 ntBASIC18.04■□□□□ 0.48
MT-CO1P00395 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.04■□□□□ 0.48
MT-CO1P00395 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.04■□□□□ 0.48
MT-CO1P00395 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.04■□□□□ 0.48
MT-CO1P00395 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.04■□□□□ 0.48
MT-CO1P00395 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.04■□□□□ 0.48
MT-CO1P00395 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
MT-CO1P00395 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
MT-CO1P00395 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
MT-CO1P00395 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.04■□□□□ 0.48
MT-CO1P00395 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MT-CO1P00395 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MT-CO1P00395 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.04■□□□□ 0.48
MT-CO1P00395 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MT-CO1P00395 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
MT-CO1P00395 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
MT-CO1P00395 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
MT-CO1P00395 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.04■□□□□ 0.48
MT-CO1P00395 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MT-CO1P00395 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MT-CO1P00395 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
MT-CO1P00395 AC008764.6-201ENST00000595909 2069 ntBASIC18.03■□□□□ 0.48
MT-CO1P00395 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.03■□□□□ 0.48
MT-CO1P00395 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.03■□□□□ 0.48
MT-CO1P00395 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
MT-CO1P00395 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
MT-CO1P00395 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
MT-CO1P00395 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MT-CO1P00395 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.03■□□□□ 0.48
MT-CO1P00395 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
MT-CO1P00395 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MT-CO1P00395 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
MT-CO1P00395 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
MT-CO1P00395 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MT-CO1P00395 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
MT-CO1P00395 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
MT-CO1P00395 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
MT-CO1P00395 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MT-CO1P00395 COX5BP2-201ENST00000392354 334 ntBASIC18.03■□□□□ 0.48
MT-CO1P00395 ABCD1P5-201ENST00000445663 754 ntBASIC18.03■□□□□ 0.48
MT-CO1P00395 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.03■□□□□ 0.48
MT-CO1P00395 FDX1P1-201ENST00000449115 551 ntBASIC18.03■□□□□ 0.48
MT-CO1P00395 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.03■□□□□ 0.48
MT-CO1P00395 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.03■□□□□ 0.48
MT-CO1P00395 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.03■□□□□ 0.48
MT-CO1P00395 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.03■□□□□ 0.48
MT-CO1P00395 AC106795.1-205ENST00000512851 1056 ntBASIC18.03■□□□□ 0.48
MT-CO1P00395 AP002469.2-201ENST00000531724 424 ntBASIC18.03■□□□□ 0.48
MT-CO1P00395 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
MT-CO1P00395 KLK8-205ENST00000593490 267 ntTSL 3 BASIC18.03■□□□□ 0.48
MT-CO1P00395 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
MT-CO1P00395 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
MT-CO1P00395 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
MT-CO1P00395 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.03■□□□□ 0.48
MT-CO1P00395 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.03■□□□□ 0.48
MT-CO1P00395 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
MT-CO1P00395 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MT-CO1P00395 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.03■□□□□ 0.48
MT-CO1P00395 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
MT-CO1P00395 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MT-CO1P00395 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.03■□□□□ 0.48
MT-CO1P00395 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
MT-CO1P00395 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.03■□□□□ 0.48
MT-CO1P00395 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MT-CO1P00395 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
MT-CO1P00395 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
MT-CO1P00395 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.02■□□□□ 0.48
MT-CO1P00395 OR6D1P-202ENST00000641007 5290 ntBASIC18.02■□□□□ 0.48
MT-CO1P00395 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
MT-CO1P00395 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.02■□□□□ 0.48
MT-CO1P00395 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
MT-CO1P00395 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
MT-CO1P00395 SIRPAP1-201ENST00000448467 1770 ntBASIC18.02■□□□□ 0.48
MT-CO1P00395 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.02■□□□□ 0.48
MT-CO1P00395 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
MT-CO1P00395 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.02■□□□□ 0.48
MT-CO1P00395 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
MT-CO1P00395 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
MT-CO1P00395 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
MT-CO1P00395 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
MT-CO1P00395 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
MT-CO1P00395 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
MT-CO1P00395 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
MT-CO1P00395 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.02■□□□□ 0.48
MT-CO1P00395 KRT8P10-201ENST00000450021 1447 ntBASIC18.02■□□□□ 0.48
MT-CO1P00395 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.02■□□□□ 0.48
MT-CO1P00395 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.02■□□□□ 0.48
MT-CO1P00395 AP005117.1-201ENST00000584346 1413 ntBASIC18.02■□□□□ 0.48
MT-CO1P00395 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
MT-CO1P00395 AC012313.1-201ENST00000593393 3059 ntBASIC18.02■□□□□ 0.48
MT-CO1P00395 MTDHP3-201ENST00000594186 672 ntBASIC18.02■□□□□ 0.48
MT-CO1P00395 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms