Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
CACNA1FO60840 UNC93B6-202ENST00000528242 690 ntBASIC21.96■■□□□ 1.11
CACNA1FO60840 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC21.96■■□□□ 1.11
CACNA1FO60840 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
CACNA1FO60840 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CACNA1FO60840 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
CACNA1FO60840 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CACNA1FO60840 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CACNA1FO60840 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CACNA1FO60840 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC21.96■■□□□ 1.11
CACNA1FO60840 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CACNA1FO60840 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CACNA1FO60840 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CACNA1FO60840 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CACNA1FO60840 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CACNA1FO60840 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CACNA1FO60840 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CACNA1FO60840 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CACNA1FO60840 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CACNA1FO60840 AC007967.2-201ENST00000432613 625 ntBASIC21.96■■□□□ 1.11
CACNA1FO60840 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CACNA1FO60840 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC21.96■■□□□ 1.11
CACNA1FO60840 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC21.96■■□□□ 1.11
CACNA1FO60840 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CACNA1FO60840 AC023511.2-201ENST00000618803 211 ntBASIC21.96■■□□□ 1.11
CACNA1FO60840 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
CACNA1FO60840 CROCCP2-202ENST00000412962 2773 ntBASIC21.96■■□□□ 1.11
CACNA1FO60840 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CACNA1FO60840 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.11
CACNA1FO60840 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC21.95■■□□□ 1.11
CACNA1FO60840 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC21.95■■□□□ 1.1
CACNA1FO60840 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CACNA1FO60840 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
CACNA1FO60840 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CACNA1FO60840 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CACNA1FO60840 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CACNA1FO60840 PMS2P1-201ENST00000431037 1228 ntBASIC21.95■■□□□ 1.1
CACNA1FO60840 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC21.95■■□□□ 1.1
CACNA1FO60840 HCG4B-203ENST00000450128 991 ntBASIC21.95■■□□□ 1.1
CACNA1FO60840 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC21.95■■□□□ 1.1
CACNA1FO60840 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC21.95■■□□□ 1.1
CACNA1FO60840 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC21.95■■□□□ 1.1
CACNA1FO60840 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC21.95■■□□□ 1.1
CACNA1FO60840 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC21.95■■□□□ 1.1
CACNA1FO60840 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CACNA1FO60840 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CACNA1FO60840 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
CACNA1FO60840 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CACNA1FO60840 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CACNA1FO60840 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC21.95■■□□□ 1.1
CACNA1FO60840 AC002310.6-201ENST00000624451 1377 ntBASIC21.95■■□□□ 1.1
CACNA1FO60840 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC21.94■■□□□ 1.1
CACNA1FO60840 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CACNA1FO60840 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CACNA1FO60840 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CACNA1FO60840 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC21.94■■□□□ 1.1
CACNA1FO60840 CENPM-204ENST00000402420 688 ntTSL 5 BASIC21.94■■□□□ 1.1
CACNA1FO60840 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
CACNA1FO60840 AL591424.1-201ENST00000442569 1213 ntBASIC21.94■■□□□ 1.1
CACNA1FO60840 AC009947.1-201ENST00000444350 727 ntBASIC21.94■■□□□ 1.1
CACNA1FO60840 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CACNA1FO60840 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC21.94■■□□□ 1.1
CACNA1FO60840 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC21.94■■□□□ 1.1
CACNA1FO60840 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CACNA1FO60840 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CACNA1FO60840 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC21.94■■□□□ 1.1
CACNA1FO60840 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CACNA1FO60840 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC21.94■■□□□ 1.1
CACNA1FO60840 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
CACNA1FO60840 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
CACNA1FO60840 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC21.94■■□□□ 1.1
CACNA1FO60840 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC21.94■■□□□ 1.1
CACNA1FO60840 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
CACNA1FO60840 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC21.94■■□□□ 1.1
CACNA1FO60840 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CACNA1FO60840 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
CACNA1FO60840 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
CACNA1FO60840 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
CACNA1FO60840 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC21.93■■□□□ 1.1
CACNA1FO60840 AL645608.8-201ENST00000606034 2086 ntBASIC21.93■■□□□ 1.1
CACNA1FO60840 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CACNA1FO60840 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.93■■□□□ 1.1
CACNA1FO60840 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CACNA1FO60840 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC21.93■■□□□ 1.1
CACNA1FO60840 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC21.93■■□□□ 1.1
CACNA1FO60840 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC21.93■■□□□ 1.1
CACNA1FO60840 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
CACNA1FO60840 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC21.93■■□□□ 1.1
CACNA1FO60840 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC21.93■■□□□ 1.1
CACNA1FO60840 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC21.93■■□□□ 1.1
CACNA1FO60840 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CACNA1FO60840 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
CACNA1FO60840 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CACNA1FO60840 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC21.93■■□□□ 1.1
CACNA1FO60840 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CACNA1FO60840 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
CACNA1FO60840 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC21.93■■□□□ 1.1
CACNA1FO60840 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC21.93■■□□□ 1.1
CACNA1FO60840 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC21.92■■□□□ 1.1
CACNA1FO60840 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC21.92■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms