Protein–RNA interactions for Protein: O60548

FOXD2, Forkhead box protein D2, humanhuman

Predicted RBP Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD2O60548 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
FOXD2O60548 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
FOXD2O60548 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.71■□□□□ 0.43
FOXD2O60548 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
FOXD2O60548 AC011270.2-201ENST00000624293 2550 ntBASIC17.71■□□□□ 0.43
FOXD2O60548 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
FOXD2O60548 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
FOXD2O60548 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.71■□□□□ 0.43
FOXD2O60548 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
FOXD2O60548 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.71■□□□□ 0.43
FOXD2O60548 HLA-J-203ENST00000494367 1087 ntBASIC17.71■□□□□ 0.43
FOXD2O60548 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
FOXD2O60548 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
FOXD2O60548 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.71■□□□□ 0.43
FOXD2O60548 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
FOXD2O60548 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
FOXD2O60548 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.71■□□□□ 0.43
FOXD2O60548 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
FOXD2O60548 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.71■□□□□ 0.43
FOXD2O60548 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
FOXD2O60548 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
FOXD2O60548 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.71■□□□□ 0.43
FOXD2O60548 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
FOXD2O60548 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
FOXD2O60548 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
FOXD2O60548 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
FOXD2O60548 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.71■□□□□ 0.43
FOXD2O60548 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.71■□□□□ 0.43
FOXD2O60548 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
FOXD2O60548 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
FOXD2O60548 Z98044.1-201ENST00000632503 1764 ntBASIC17.71■□□□□ 0.43
FOXD2O60548 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
FOXD2O60548 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXD2O60548 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXD2O60548 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXD2O60548 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXD2O60548 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.7■□□□□ 0.42
FOXD2O60548 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXD2O60548 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
FOXD2O60548 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXD2O60548 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXD2O60548 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXD2O60548 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXD2O60548 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
FOXD2O60548 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.7■□□□□ 0.42
FOXD2O60548 PCDHA12-202ENST00000613593 2588 ntBASIC17.7■□□□□ 0.42
FOXD2O60548 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXD2O60548 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXD2O60548 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXD2O60548 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.7■□□□□ 0.42
FOXD2O60548 CALY-203ENST00000368558 825 ntTSL 5 BASIC17.7■□□□□ 0.42
FOXD2O60548 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXD2O60548 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.7■□□□□ 0.42
FOXD2O60548 MIR149-201ENST00000384879 89 ntBASIC17.7■□□□□ 0.42
FOXD2O60548 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.7■□□□□ 0.42
FOXD2O60548 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.7■□□□□ 0.42
FOXD2O60548 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXD2O60548 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.7■□□□□ 0.42
FOXD2O60548 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.7■□□□□ 0.42
FOXD2O60548 AC068587.9-201ENST00000641814 219 ntBASIC17.7■□□□□ 0.42
FOXD2O60548 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.7■□□□□ 0.42
FOXD2O60548 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
FOXD2O60548 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
FOXD2O60548 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
FOXD2O60548 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXD2O60548 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXD2O60548 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.69■□□□□ 0.42
FOXD2O60548 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
FOXD2O60548 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
FOXD2O60548 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
FOXD2O60548 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.69■□□□□ 0.42
FOXD2O60548 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.69■□□□□ 0.42
FOXD2O60548 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
FOXD2O60548 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
FOXD2O60548 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
FOXD2O60548 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.69■□□□□ 0.42
FOXD2O60548 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.69■□□□□ 0.42
FOXD2O60548 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.69■□□□□ 0.42
FOXD2O60548 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.69■□□□□ 0.42
FOXD2O60548 SPCS2P1-201ENST00000561636 679 ntBASIC17.69■□□□□ 0.42
FOXD2O60548 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.69■□□□□ 0.42
FOXD2O60548 AL022326.1-202ENST00000641533 845 ntBASIC17.69■□□□□ 0.42
FOXD2O60548 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
FOXD2O60548 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
FOXD2O60548 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.69■□□□□ 0.42
FOXD2O60548 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
FOXD2O60548 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.69■□□□□ 0.42
FOXD2O60548 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
FOXD2O60548 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
FOXD2O60548 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.69■□□□□ 0.42
FOXD2O60548 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
FOXD2O60548 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
FOXD2O60548 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.68■□□□□ 0.42
FOXD2O60548 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.68■□□□□ 0.42
FOXD2O60548 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
FOXD2O60548 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
FOXD2O60548 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
FOXD2O60548 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
FOXD2O60548 TEX21P-204ENST00000641479 1693 ntBASIC17.68■□□□□ 0.42
FOXD2O60548 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms