Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
KDELR3O43731 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
KDELR3O43731 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KDELR3O43731 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KDELR3O43731 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KDELR3O43731 AC148477.5-201ENST00000625164 1645 ntBASIC17.82■□□□□ 0.44
KDELR3O43731 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.82■□□□□ 0.44
KDELR3O43731 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
KDELR3O43731 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
KDELR3O43731 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
KDELR3O43731 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
KDELR3O43731 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.82■□□□□ 0.44
KDELR3O43731 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
KDELR3O43731 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.81■□□□□ 0.44
KDELR3O43731 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
KDELR3O43731 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.81■□□□□ 0.44
KDELR3O43731 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
KDELR3O43731 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
KDELR3O43731 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
KDELR3O43731 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
KDELR3O43731 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
KDELR3O43731 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
KDELR3O43731 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
KDELR3O43731 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.81■□□□□ 0.44
KDELR3O43731 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
KDELR3O43731 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
KDELR3O43731 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.81■□□□□ 0.44
KDELR3O43731 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.81■□□□□ 0.44
KDELR3O43731 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
KDELR3O43731 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
KDELR3O43731 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.81■□□□□ 0.44
KDELR3O43731 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.81■□□□□ 0.44
KDELR3O43731 AC021087.4-201ENST00000563761 564 ntBASIC17.81■□□□□ 0.44
KDELR3O43731 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.81■□□□□ 0.44
KDELR3O43731 AL022326.1-202ENST00000641533 845 ntBASIC17.81■□□□□ 0.44
KDELR3O43731 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
KDELR3O43731 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.81■□□□□ 0.44
KDELR3O43731 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
KDELR3O43731 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
KDELR3O43731 AC004817.3-201ENST00000602957 2129 ntBASIC17.81■□□□□ 0.44
KDELR3O43731 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
KDELR3O43731 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
KDELR3O43731 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
KDELR3O43731 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
KDELR3O43731 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
KDELR3O43731 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
KDELR3O43731 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.8■□□□□ 0.44
KDELR3O43731 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
KDELR3O43731 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
KDELR3O43731 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.8■□□□□ 0.44
KDELR3O43731 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
KDELR3O43731 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
KDELR3O43731 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.8■□□□□ 0.44
KDELR3O43731 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
KDELR3O43731 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.8■□□□□ 0.44
KDELR3O43731 AC046185.3-201ENST00000623228 1824 ntBASIC17.8■□□□□ 0.44
KDELR3O43731 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
KDELR3O43731 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
KDELR3O43731 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
KDELR3O43731 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.8■□□□□ 0.44
KDELR3O43731 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.8■□□□□ 0.44
KDELR3O43731 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.8■□□□□ 0.44
KDELR3O43731 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
KDELR3O43731 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.8■□□□□ 0.44
KDELR3O43731 RNPS1P1-201ENST00000507437 918 ntBASIC17.8■□□□□ 0.44
KDELR3O43731 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.8■□□□□ 0.44
KDELR3O43731 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.8■□□□□ 0.44
KDELR3O43731 MTDHP4-201ENST00000600287 670 ntBASIC17.8■□□□□ 0.44
KDELR3O43731 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
KDELR3O43731 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.8■□□□□ 0.44
KDELR3O43731 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
KDELR3O43731 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
KDELR3O43731 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
KDELR3O43731 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
KDELR3O43731 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
KDELR3O43731 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
KDELR3O43731 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
KDELR3O43731 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
KDELR3O43731 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KDELR3O43731 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
KDELR3O43731 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KDELR3O43731 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.79■□□□□ 0.44
KDELR3O43731 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
KDELR3O43731 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KDELR3O43731 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
KDELR3O43731 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.79■□□□□ 0.44
KDELR3O43731 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
KDELR3O43731 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KDELR3O43731 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
KDELR3O43731 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
KDELR3O43731 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
KDELR3O43731 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.79■□□□□ 0.44
KDELR3O43731 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.79■□□□□ 0.44
KDELR3O43731 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.79■□□□□ 0.44
KDELR3O43731 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.79■□□□□ 0.44
KDELR3O43731 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.79■□□□□ 0.44
KDELR3O43731 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.79■□□□□ 0.44
KDELR3O43731 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.79■□□□□ 0.44
KDELR3O43731 AC073648.2-201ENST00000510116 352 ntBASIC17.79■□□□□ 0.44
KDELR3O43731 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms