Protein–RNA interactions for Protein: O43638

FOXS1, Forkhead box protein S1, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXS1O43638 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
FOXS1O43638 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.52■□□□□ 0.24
FOXS1O43638 AC079776.4-201ENST00000511039 504 ntBASIC16.52■□□□□ 0.24
FOXS1O43638 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.52■□□□□ 0.24
FOXS1O43638 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.52■□□□□ 0.24
FOXS1O43638 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.52■□□□□ 0.24
FOXS1O43638 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
FOXS1O43638 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
FOXS1O43638 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
FOXS1O43638 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
FOXS1O43638 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
FOXS1O43638 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
FOXS1O43638 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.52■□□□□ 0.23
FOXS1O43638 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.52■□□□□ 0.23
FOXS1O43638 GNAS-203ENST00000306120 1878 ntBASIC16.52■□□□□ 0.23
FOXS1O43638 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
FOXS1O43638 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
FOXS1O43638 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
FOXS1O43638 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
FOXS1O43638 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.23
FOXS1O43638 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
FOXS1O43638 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
FOXS1O43638 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
FOXS1O43638 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
FOXS1O43638 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.51■□□□□ 0.23
FOXS1O43638 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.51■□□□□ 0.23
FOXS1O43638 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.51■□□□□ 0.23
FOXS1O43638 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
FOXS1O43638 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
FOXS1O43638 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
FOXS1O43638 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.51■□□□□ 0.23
FOXS1O43638 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
FOXS1O43638 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
FOXS1O43638 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.51■□□□□ 0.23
FOXS1O43638 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
FOXS1O43638 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.51■□□□□ 0.23
FOXS1O43638 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
FOXS1O43638 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.51■□□□□ 0.23
FOXS1O43638 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.51■□□□□ 0.23
FOXS1O43638 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
FOXS1O43638 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.51■□□□□ 0.23
FOXS1O43638 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
FOXS1O43638 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
FOXS1O43638 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
FOXS1O43638 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
FOXS1O43638 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.51■□□□□ 0.23
FOXS1O43638 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
FOXS1O43638 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
FOXS1O43638 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
FOXS1O43638 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
FOXS1O43638 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
FOXS1O43638 LYSMD4-203ENST00000378904 2122 ntBASIC16.51■□□□□ 0.23
FOXS1O43638 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.51■□□□□ 0.23
FOXS1O43638 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
FOXS1O43638 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.5■□□□□ 0.23
FOXS1O43638 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.5■□□□□ 0.23
FOXS1O43638 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.5■□□□□ 0.23
FOXS1O43638 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FOXS1O43638 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
FOXS1O43638 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
FOXS1O43638 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FOXS1O43638 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FOXS1O43638 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FOXS1O43638 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.5■□□□□ 0.23
FOXS1O43638 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.5■□□□□ 0.23
FOXS1O43638 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.5■□□□□ 0.23
FOXS1O43638 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
FOXS1O43638 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.5■□□□□ 0.23
FOXS1O43638 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.5■□□□□ 0.23
FOXS1O43638 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.5■□□□□ 0.23
FOXS1O43638 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.5■□□□□ 0.23
FOXS1O43638 AC012640.2-201ENST00000561606 901 ntBASIC16.5■□□□□ 0.23
FOXS1O43638 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
FOXS1O43638 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.5■□□□□ 0.23
FOXS1O43638 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.5■□□□□ 0.23
FOXS1O43638 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.5■□□□□ 0.23
FOXS1O43638 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FOXS1O43638 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FOXS1O43638 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FOXS1O43638 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FOXS1O43638 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.5■□□□□ 0.23
FOXS1O43638 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
FOXS1O43638 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FOXS1O43638 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.5■□□□□ 0.23
FOXS1O43638 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.5■□□□□ 0.23
FOXS1O43638 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FOXS1O43638 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
FOXS1O43638 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
FOXS1O43638 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.5■□□□□ 0.23
FOXS1O43638 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.5■□□□□ 0.23
FOXS1O43638 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.49■□□□□ 0.23
FOXS1O43638 AC046185.3-201ENST00000623228 1824 ntBASIC16.49■□□□□ 0.23
FOXS1O43638 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.49■□□□□ 0.23
FOXS1O43638 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.49■□□□□ 0.23
FOXS1O43638 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FOXS1O43638 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.49■□□□□ 0.23
FOXS1O43638 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.49■□□□□ 0.23
FOXS1O43638 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
FOXS1O43638 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
FOXS1O43638 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms