Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
XRCC2O43543 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
XRCC2O43543 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
XRCC2O43543 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
XRCC2O43543 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
XRCC2O43543 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
XRCC2O43543 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
XRCC2O43543 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
XRCC2O43543 RN7SL606P-201ENST00000472779 293 ntBASIC15.3■□□□□ 0.04
XRCC2O43543 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
XRCC2O43543 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC15.3■□□□□ 0.04
XRCC2O43543 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC15.3■□□□□ 0.04
XRCC2O43543 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC15.3■□□□□ 0.04
XRCC2O43543 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC15.3■□□□□ 0.04
XRCC2O43543 AC011840.4-201ENST00000578471 627 ntBASIC15.3■□□□□ 0.04
XRCC2O43543 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC15.3■□□□□ 0.04
XRCC2O43543 NDUFV2-AS1-203ENST00000608008 779 ntBASIC15.3■□□□□ 0.04
XRCC2O43543 IGHV3-41-201ENST00000613121 348 ntBASIC15.3■□□□□ 0.04
XRCC2O43543 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC15.3■□□□□ 0.04
XRCC2O43543 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC15.3■□□□□ 0.04
XRCC2O43543 AC124864.1-201ENST00000623408 392 ntBASIC15.3■□□□□ 0.04
XRCC2O43543 AL590326.2-201ENST00000625139 305 ntBASIC15.3■□□□□ 0.04
XRCC2O43543 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC15.3■□□□□ 0.04
XRCC2O43543 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
XRCC2O43543 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
XRCC2O43543 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
XRCC2O43543 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
XRCC2O43543 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
XRCC2O43543 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
XRCC2O43543 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
XRCC2O43543 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
XRCC2O43543 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
XRCC2O43543 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
XRCC2O43543 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
XRCC2O43543 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
XRCC2O43543 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
XRCC2O43543 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
XRCC2O43543 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
XRCC2O43543 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
XRCC2O43543 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
XRCC2O43543 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
XRCC2O43543 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
XRCC2O43543 AL023806.1-201ENST00000603994 1649 ntBASIC15.29■□□□□ 0.04
XRCC2O43543 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
XRCC2O43543 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
XRCC2O43543 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
XRCC2O43543 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC15.29■□□□□ 0.04
XRCC2O43543 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
XRCC2O43543 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
XRCC2O43543 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC15.29■□□□□ 0.04
XRCC2O43543 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
XRCC2O43543 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC15.29■□□□□ 0.04
XRCC2O43543 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
XRCC2O43543 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
XRCC2O43543 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
XRCC2O43543 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
XRCC2O43543 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC15.29■□□□□ 0.04
XRCC2O43543 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
XRCC2O43543 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
XRCC2O43543 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
XRCC2O43543 BX276092.5-203ENST00000456199 560 ntBASIC15.29■□□□□ 0.04
XRCC2O43543 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
XRCC2O43543 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC15.29■□□□□ 0.04
XRCC2O43543 CD320-202ENST00000537716 1119 ntTSL 2 BASIC15.29■□□□□ 0.04
XRCC2O43543 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC15.29■□□□□ 0.04
XRCC2O43543 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC15.29■□□□□ 0.04
XRCC2O43543 AL121672.3-201ENST00000608644 468 ntBASIC15.29■□□□□ 0.04
XRCC2O43543 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
XRCC2O43543 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC15.29■□□□□ 0.04
XRCC2O43543 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC15.29■□□□□ 0.04
XRCC2O43543 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
XRCC2O43543 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC15.29■□□□□ 0.04
XRCC2O43543 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC15.29■□□□□ 0.04
XRCC2O43543 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
XRCC2O43543 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
XRCC2O43543 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC15.29■□□□□ 0.04
XRCC2O43543 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
XRCC2O43543 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
XRCC2O43543 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
XRCC2O43543 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC15.29■□□□□ 0.04
XRCC2O43543 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC15.29■□□□□ 0.04
XRCC2O43543 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
XRCC2O43543 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
XRCC2O43543 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
XRCC2O43543 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC15.28■□□□□ 0.04
XRCC2O43543 ADM-208ENST00000534464 1640 ntTSL 2 BASIC15.28■□□□□ 0.04
XRCC2O43543 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC15.28■□□□□ 0.04
XRCC2O43543 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
XRCC2O43543 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
XRCC2O43543 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
XRCC2O43543 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
XRCC2O43543 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
XRCC2O43543 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
XRCC2O43543 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC15.28■□□□□ 0.04
XRCC2O43543 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
XRCC2O43543 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
XRCC2O43543 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC15.28■□□□□ 0.04
XRCC2O43543 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
XRCC2O43543 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
XRCC2O43543 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms