Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TO15178 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TO15178 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TO15178 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.19■□□□□ 0.18
TO15178 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.19■□□□□ 0.18
TO15178 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.19■□□□□ 0.18
TO15178 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
TO15178 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.19■□□□□ 0.18
TO15178 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.19■□□□□ 0.18
TO15178 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TO15178 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TO15178 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
TO15178 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TO15178 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TO15178 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TO15178 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.19■□□□□ 0.18
TO15178 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TO15178 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.19■□□□□ 0.18
TO15178 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.19■□□□□ 0.18
TO15178 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TO15178 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
TO15178 AC003669.1-201ENST00000334569 611 ntBASIC16.19■□□□□ 0.18
TO15178 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.19■□□□□ 0.18
TO15178 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TO15178 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TO15178 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TO15178 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.19■□□□□ 0.18
TO15178 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TO15178 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.19■□□□□ 0.18
TO15178 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TO15178 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.19■□□□□ 0.18
TO15178 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
TO15178 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TO15178 REXO1L6P-202ENST00000619970 1078 ntBASIC16.19■□□□□ 0.18
TO15178 AC073592.5-201ENST00000624854 528 ntBASIC16.19■□□□□ 0.18
TO15178 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TO15178 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.19■□□□□ 0.18
TO15178 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TO15178 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.19■□□□□ 0.18
TO15178 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TO15178 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TO15178 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TO15178 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.19■□□□□ 0.18
TO15178 AP005117.1-201ENST00000584346 1413 ntBASIC16.19■□□□□ 0.18
TO15178 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TO15178 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.19■□□□□ 0.18
TO15178 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
TO15178 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
TO15178 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
TO15178 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TO15178 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TO15178 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.18■□□□□ 0.18
TO15178 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TO15178 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TO15178 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.18■□□□□ 0.18
TO15178 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
TO15178 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TO15178 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TO15178 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TO15178 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.18■□□□□ 0.18
TO15178 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
TO15178 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TO15178 AC132938.5-201ENST00000624980 1813 ntBASIC16.18■□□□□ 0.18
TO15178 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TO15178 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TO15178 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TO15178 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.18■□□□□ 0.18
TO15178 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.18■□□□□ 0.18
TO15178 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.18■□□□□ 0.18
TO15178 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.18■□□□□ 0.18
TO15178 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TO15178 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.18■□□□□ 0.18
TO15178 AP001269.4-201ENST00000609611 512 ntBASIC16.18■□□□□ 0.18
TO15178 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TO15178 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
TO15178 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TO15178 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
TO15178 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
TO15178 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TO15178 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.18■□□□□ 0.18
TO15178 AL139384.1-201ENST00000612143 3047 ntBASIC16.18■□□□□ 0.18
TO15178 AC011270.2-201ENST00000624293 2550 ntBASIC16.18■□□□□ 0.18
TO15178 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
TO15178 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
TO15178 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.18■□□□□ 0.18
TO15178 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TO15178 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TO15178 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TO15178 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.17■□□□□ 0.18
TO15178 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TO15178 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
TO15178 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.17■□□□□ 0.18
TO15178 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
TO15178 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
TO15178 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TO15178 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TO15178 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TO15178 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TO15178 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
TO15178 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms